Annotation Detail for MDP1
Basic Information Top
| Gene Symbol: | MDP1 ( FN6Pase,MDP-1,MGC5987 ) |
|---|---|
| Gene Full Name: | magnesium-dependent phosphatase 1 |
| Band: | 14q12 |
| Quick Links | Entrez ID:145553; OMIM: NA; Uniprot ID:MGDP1_HUMAN; ENSEMBL ID: ENSG00000213920; HGNC ID: 28781 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.220963
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 15 / 564012 | 26 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 31 / 1939121 | 15 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 82 / 3360307 | 24 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 18 / 1100989 | 16 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 1 / 16212 | 61 |  |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 5 / 89626 | 55 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 24 / 211777 | 113 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 15 / 336974 | 44 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 16 / 214812 | 74 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_8143_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.6 ± 0.6 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.77 ± 0.23 | |
| Basal Part of Pons | 8.46 ± 0.22 | |
| Cerebellar Cortex | 8.12 ± 0.27 | |
| Cerebellar Nuclei | 8.18 ± 0.44 | |
| Claustrum | 7.81 ± 0.67 | |
| Epithalamus | 8.35 ± 0.24 | |
| Frontal Lobe | 8.19 ± 0.34 | |
| Globus Pallidus | 7.81 ± 0.24 | |
| Hypothalamus | 8.39 ± 0.2 | |
| Insula | 8.23 ± 0.24 | |
| Limbic Lobe | 7.74 ± 0.54 | |
| Mesencephalon | 7.89 ± 0.4 | |
| Myelencephalon | 7.94 ± 0.46 | |
| Occipital Lobe | 7.42 ± 0.53 | |
| Parietal Lobe | 7.99 ± 0.37 | |
| Pontine Tegmentum | 7.99 ± 0.33 | |
| Striatum | 7.35 ± 0.33 | |
| Subthalamus | 8.33 ± 0.33 | |
| Temporal Lobe | 8.17 ± 0.33 | |
| Thalamus | 7.95 ± 0.37 | |
| White Matter | 8.01 ± 0.21 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 1810034K20Rik | CB | Cerebellum | 10.85 | |
| 9.92 | | |||
| 1810034K20Rik | CTX | Cerebral cortex | 28.85 | |
| 18.65 | | |||
| 1810034K20Rik | HIP | Hippocampal region | 19.97 | |
| 18.61 | | |||
| 1810034K20Rik | HPF | Hippocampal formation | 26.17 | |
| 21.86 | | |||
| 1810034K20Rik | HY | Hypothalamus | 13.9 | |
| 9.42 | | |||
| 1810034K20Rik | LSX | Lateral septal complex | 9.6 | |
| 6.14 | | |||
| 1810034K20Rik | MB | Midbrain | 13.7 | |
| 10.46 | | |||
| 1810034K20Rik | MY | Medulla | 28.89 | |
| 27.15 | | |||
| 1810034K20Rik | OLF | Olfactory bulb | 30.45 | |
| 20.62 | | |||
| 1810034K20Rik | P | Pons | 21.09 | |
| 19.2 | | |||
| 1810034K20Rik | PAL | Pallidum | 13.85 | |
| 10.52 | | |||
| 1810034K20Rik | RHP | Retrohippocampal region | 42.88 | |
| 30.94 | | |||
| 1810034K20Rik | sAMY | Striatum-like amygdalar nuclei | 19.66 | |
| 12.1 | | |||
| 1810034K20Rik | STR | Striatum | 10.39 | |
| 6.62 | | |||
| 1810034K20Rik | STRd | Striatum dorsal region | 8.37 | |
| 5.46 | | |||
| 1810034K20Rik | STRv | Striatum ventral region | 11.99 | |
| 7.17 | | |||
| 1810034K20Rik | TH | Thalamus | 13.08 | |
| 9.14 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| MGDP1_HUMAN_46 | 11 | 46 | 56 | LYPEVPEVLKR | PRIDE |
| MGDP1_HUMAN_57 | 13 | 57 | 69 | LQSLGVPGAAASR | PRIDE |
| PAp00131612 | 18 | 71 | 88 | TSEIEGANQLLELFDLFR | Peptide Atlas |