Annotation Detail for FAM81A
Basic Information Top
| Gene Symbol: | FAM81A ( MGC26690 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 81, member A |
| Band: | 15q22.2 |
| Quick Links | Entrez ID:145773; OMIM: NA; Uniprot ID:FA81A_HUMAN; ENSEMBL ID: ENSG00000157470; HGNC ID: 28379 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.531168
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 20 / 564012 | 35 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 21 / 1939121 | 10 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 2 / 263845 | 7 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 76 / 3360307 | 22 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 42 / 1100989 | 38 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 1 / 24145 | 41 | |
| liver | 1 / 207743 | 4 | |
| lung | 11 / 336974 | 32 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 10 / 91610 | 109 |  |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 5 / 189345 | 26 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P3295
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.5 ± 0.67 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.84 ± 0.49 | |
| Basal Part of Pons | 7.02 ± 0.42 | |
| Cerebellar Cortex | 6.07 ± 0.44 | |
| Cerebellar Nuclei | 5.74 ± 0.55 | |
| Claustrum | 7.17 ± 0.75 | |
| Epithalamus | 7.19 ± 0.8 | |
| Frontal Lobe | 7.37 ± 0.54 | |
| Globus Pallidus | 5.63 ± 1.44 | |
| Hypothalamus | 6.85 ± 0.45 | |
| Insula | 7.28 ± 0.31 | |
| Limbic Lobe | 7.5 ± 0.74 | |
| Mesencephalon | 6.58 ± 0.66 | |
| Myelencephalon | 6.87 ± 0.8 | |
| Occipital Lobe | 6.29 ± 0.87 | |
| Parietal Lobe | 7.4 ± 0.69 | |
| Pontine Tegmentum | 6.81 ± 0.88 | |
| Striatum | 5.99 ± 1.56 | |
| Subthalamus | 6.94 ± 0.3 | |
| Temporal Lobe | 7.25 ± 0.47 | |
| Thalamus | 6.07 ± 0.66 | |
| White Matter | 5.38 ± 0.92 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 6430514L14Rik | CB | Cerebellum | 3.1 | |
| 4.96 | | |||
| 6430514L14Rik | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| 6430514L14Rik | HIP | Hippocampal region | 82.09 | |
| 100 | | |||
| 6430514L14Rik | HPF | Hippocampal formation | 98.36 | |
| 100 | | |||
| 6430514L14Rik | HY | Hypothalamus | 12.11 | |
| 11.09 | | |||
| 6430514L14Rik | LSX | Lateral septal complex | 95.63 | |
| 100 | | |||
| 6430514L14Rik | MB | Midbrain | 10.25 | |
| 11.01 | | |||
| 6430514L14Rik | MY | Medulla | 19 | |
| 25.15 | | |||
| 6430514L14Rik | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| 6430514L14Rik | P | Pons | 8.5 | |
| 9.51 | | |||
| 6430514L14Rik | PAL | Pallidum | 27.99 | |
| 29.54 | | |||
| 6430514L14Rik | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| 6430514L14Rik | sAMY | Striatum-like amygdalar nuclei | 75.15 | |
| 78.83 | | |||
| 6430514L14Rik | STR | Striatum | 31.3 | |
| 33.18 | | |||
| 6430514L14Rik | STRd | Striatum dorsal region | 16.55 | |
| 18.62 | | |||
| 6430514L14Rik | STRv | Striatum ventral region | 22.21 | |
| 18.97 | | |||
| 6430514L14Rik | TH | Thalamus | 50.61 | |
| 55.51 | |