AutismKB 2.0

Annotation Detail for CDAN1


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Basic Information Top
Gene Symbol:CDAN1 ( CDA1,CDAI,DLT,PRO1295 )
Gene Full Name: congenital dyserythropoietic anemia, type I
Band: 15q15.2
Quick LinksEntrez ID:146059; OMIM: 607465; Uniprot ID:CDAN1_HUMAN; ENSEMBL ID: ENSG00000140326; HGNC ID: 1713
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst2 / 6231932
fetus6 / 56401210
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult15 / 19391217
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor1 / 3436629
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor3 / 26384511
glioma4 / 10688337
head and neck tumor2 / 13630214
kidney tumor3 / 6895943
leukemia2 / 9584220
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal23 / 33603076
ovarian tumor5 / 7668265
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone0 / 716550 
bone marrow0 / 488010 
brain8 / 11009897
cervix1 / 4817120
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue4 / 21572218
esophagus0 / 202090 
eye0 / 2110540 
heart1 / 8962611
intestine0 / 2344720 
kidney4 / 21177718
larynx0 / 241450 
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node1 / 9161010
mammary gland1 / 1532716
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary7 / 10205168
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta4 / 28082514
prostate1 / 1893455
salivary gland0 / 201550 
skin1 / 2105744
spleen0 / 539520 
stomach2 / 9661920
testis1 / 3304423
thymus0 / 811310 
thyroid2 / 4747342
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus5 / 23287821
vascular0 / 517800 
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_11007_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.8 ± 1.06
Basal Forebrain2.28 ± 0.22
Basal Part of Pons2.09 ± 0.43
Cerebellar Cortex2.51 ± 0.75
Cerebellar Nuclei2.69 ± 0.75
Claustrum3.29 ± 0.8
Epithalamus2.14 ± 0.74
Frontal Lobe2.26 ± 0.64
Globus Pallidus2.84 ± 0.68
Hypothalamus2.39 ± 0.66
Insula2.4 ± 0.83
Limbic Lobe2.46 ± 0.7
Mesencephalon2.63 ± 0.71
Myelencephalon2.43 ± 0.64
Occipital Lobe2.59 ± 0.79
Parietal Lobe2.39 ± 0.69
Pontine Tegmentum2.5 ± 0.7
Striatum2.52 ± 0.64
Subthalamus2.57 ± 0.75
Temporal Lobe2.39 ± 0.65
Thalamus2.41 ± 0.65
White Matter2.72 ± 0.35
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Cdan1CBCerebellum15.41
15.66
Cdan1CTXCerebral cortex26.69
16.61
Cdan1HIPHippocampal region19.05
16.76
Cdan1HPFHippocampal formation18.86
15.18
Cdan1HYHypothalamus5.69
3.59
Cdan1LSXLateral septal complex7.09
4.15
Cdan1MBMidbrain15.42
12.36
Cdan1MYMedulla16.8
14.79
Cdan1OLFOlfactory bulb18.29
12.72
Cdan1PPons18.98
15.29
Cdan1PALPallidum7.06
4.74
Cdan1RHPRetrohippocampal region18.4
12.99
Cdan1sAMYStriatum-like amygdalar nuclei4.44
2.7
Cdan1STRStriatum4.25
2.79
Cdan1STRdStriatum dorsal region4.37
3.05
Cdan1STRvStriatum ventral region2.32
1.34
Cdan1THThalamus25.82
17.36
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
CDAN1_HUMAN_1033 10 1033 1042 DVLSLAVGPR PRIDE
CDAN1_HUMAN_11 10 11 20 EEVSVAAVVR PRIDE
CDAN1_HUMAN_1113 10 1113 1122 LLHMLLSLWK PRIDE
CDAN1_HUMAN_1123 16 1123 1138 EDFQGPVPLQLLLSPR PRIDE
CDAN1_HUMAN_1139 11 1139 1149 NVGLLADTRPR PRIDE
CDAN1_HUMAN_135 17 135 151 GLEEGVSGESLPGAGGR PRIDE
CDAN1_HUMAN_2 9 2 10 AAVLESLLR PRIDE
CDAN1_HUMAN_261 35 261 295 QLQQSPTPTCPTPELGSPLPSRTGSLTDEPADPAR PRIDE
CDAN1_HUMAN_283 13 283 295 TGSLTDEPADPAR PRIDE
CDAN1_HUMAN_391 18 391 408 LLAENERLLCFSPALQGR PRIDE
CDAN1_HUMAN_398 11 398 408 LLCFSPALQGR PRIDE
CDAN1_HUMAN_457 8 457 464 DVFYEVLR PRIDE
CDAN1_HUMAN_668 10 668 677 SQVPPVLDVR PRIDE
CDAN1_HUMAN_726 11 726 736 SLVLSQESEGK PRIDE
CDAN1_HUMAN_865 8 865 872 TVEFVAER PRIDE
CDAN1_HUMAN_883 9 883 891 ATLVADLVR PRIDE
CDAN1_HUMAN_996 12 996 1007 TLRAQGPEPAAR PRIDE
PAp00063653 26 947 972 ALLPEETPAAVLSSAENIAVGLATEK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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