Annotation Detail for LRRC37BP1
Basic Information Top
| Gene Symbol: | LRRC37BP1 ( DKFZp667M2411,FLJ43993,LRRC37B2 ) |
|---|---|
| Gene Full Name: | leucine rich repeat containing 37B pseudogene 1 |
| Band: | 17q11.2 |
| Quick Links | Entrez ID:147172; OMIM: NA; Uniprot ID:; ENSEMBL ID: ; HGNC ID: 25390 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.568209
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 10 / 564012 | 17 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 187 / 1939121 | 96 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 147 / 119369 | 1231 |  |
| germ cell tumor | 2 / 263845 | 7 |  |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 74 / 3360307 | 22 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 6 / 102680 | 58 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 18 / 1100989 | 16 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 6 / 211054 | 28 | |
| heart | 1 / 89626 | 11 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 1 / 24145 | 41 | |
| liver | 5 / 207743 | 24 | |
| lung | 13 / 336974 | 38 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 9 / 189345 | 47 | |
| salivary gland | 2 / 20155 | 99 | |
| skin | 2 / 210574 | 9 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 145 / 96619 | 1500 | |
| testis | 16 / 330442 | 48 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 1 / 51780 | 19 | |
- Probe name: A_32_P94660
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.31 ± 0.41 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.39 ± 0.11 | |
| Basal Part of Pons | 6.33 ± 0.23 | |
| Cerebellar Cortex | 6.62 ± 0.23 | |
| Cerebellar Nuclei | 6.18 ± 0.2 | |
| Claustrum | 6.02 ± 0.55 | |
| Epithalamus | 6.28 ± 0.27 | |
| Frontal Lobe | 6.23 ± 0.31 | |
| Globus Pallidus | 6.08 ± 0.33 | |
| Hypothalamus | 6.27 ± 0.32 | |
| Insula | 6.3 ± 0.44 | |
| Limbic Lobe | 6.46 ± 0.44 | |
| Mesencephalon | 6.22 ± 0.26 | |
| Myelencephalon | 6.28 ± 0.34 | |
| Occipital Lobe | 6.39 ± 0.32 | |
| Parietal Lobe | 6.24 ± 0.3 | |
| Pontine Tegmentum | 6.27 ± 0.35 | |
| Striatum | 6.55 ± 0.38 | |
| Subthalamus | 6.54 ± 0.07 | |
| Temporal Lobe | 6.32 ± 0.28 | |
| Thalamus | 6.19 ± 0.23 | |
| White Matter | 6.42 ± 0.19 | |
Mouse Brain ISH 