Annotation Detail for DPY19L3
Basic Information Top
| Gene Symbol: | DPY19L3 ( DKFZp686J17135,MGC35440 ) |
|---|---|
| Gene Full Name: | dpy-19-like 3 (C. elegans) |
| Band: | 19q13.11 |
| Quick Links | Entrez ID:147991; OMIM: NA; Uniprot ID:D19L3_HUMAN; ENSEMBL ID: ENSG00000178904; HGNC ID: 27120 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.194392
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 6 / 70761 | 84 |  |
| blastocyst | 5 / 62319 | 80 | |
| fetus | 27 / 564012 | 47 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 52 / 1939121 | 26 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 137 / 3360307 | 40 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 4 / 123478 | 32 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 46 / 1100989 | 41 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 21 / 215722 | 97 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 6 / 211054 | 28 | |
| heart | 0 / 89626 | 0 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 1 / 24145 | 41 | |
| liver | 3 / 207743 | 14 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 9 / 91610 | 98 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 10 / 280825 | 35 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 4 / 210574 | 18 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 3 / 96619 | 31 | |
| testis | 5 / 330442 | 15 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 4 / 52413 | 76 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 8 / 232878 | 34 | |
| vascular | 4 / 51780 | 77 | |
Microarray in - Probe name: CUST_3581_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.12 ± 0.33 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.16 ± 0.26 | |
| Basal Part of Pons | 6.35 ± 0.38 | |
| Cerebellar Cortex | 6.77 ± 0.25 | |
| Cerebellar Nuclei | 6.47 ± 0.37 | |
| Claustrum | 6.47 ± 0.41 | |
| Epithalamus | 6.86 ± 0.27 | |
| Frontal Lobe | 6.69 ± 0.39 | |
| Globus Pallidus | 8.16 ± 0.38 | |
| Hypothalamus | 6.82 ± 0.48 | |
| Insula | 6.7 ± 0.3 | |
| Limbic Lobe | 7.21 ± 0.46 | |
| Mesencephalon | 6.97 ± 0.36 | |
| Myelencephalon | 6.94 ± 0.44 | |
| Occipital Lobe | 7.33 ± 0.54 | |
| Parietal Lobe | 6.82 ± 0.45 | |
| Pontine Tegmentum | 7.02 ± 0.43 | |
| Striatum | 7.7 ± 0.49 | |
| Subthalamus | 7.15 ± 0.73 | |
| Temporal Lobe | 6.81 ± 0.34 | |
| Thalamus | 6.86 ± 0.32 | |
| White Matter | 7.46 ± 0.22 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Dpy19l3 | CB | Cerebellum | 41.22 | |
| 100 | | |||
| Dpy19l3 | CTX | Cerebral cortex | 68.45 | |
| 61.55 | | |||
| Dpy19l3 | HIP | Hippocampal region | 70.41 | |
| 100 | | |||
| Dpy19l3 | HPF | Hippocampal formation | 75.54 | |
| 100 | | |||
| Dpy19l3 | HY | Hypothalamus | 21.2 | |
| 16.71 | | |||
| Dpy19l3 | LSX | Lateral septal complex | 59.03 | |
| 51.54 | | |||
| Dpy19l3 | MB | Midbrain | 22.79 | |
| 21.02 | | |||
| Dpy19l3 | MY | Medulla | 18.72 | |
| 20.98 | | |||
| Dpy19l3 | OLF | Olfactory bulb | 60.98 | |
| 69.08 | | |||
| Dpy19l3 | P | Pons | 22.75 | |
| 22.16 | | |||
| Dpy19l3 | PAL | Pallidum | 39.32 | |
| 41.31 | | |||
| Dpy19l3 | RHP | Retrohippocampal region | 83.9 | |
| 88.34 | | |||
| Dpy19l3 | sAMY | Striatum-like amygdalar nuclei | 51.94 | |
| 52.66 | | |||
| Dpy19l3 | STR | Striatum | 100 | |
| 99.96 | | |||
| Dpy19l3 | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Dpy19l3 | STRv | Striatum ventral region | 100 | |
| 100 | | |||
| Dpy19l3 | TH | Thalamus | 72.14 | |
| 71.92 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00502199 | 14 | 592 | 605 | TLTNHPHYEDSSLR | Peptide Atlas |