Annotation Detail for YDJC
Basic Information Top
| Gene Symbol: | YDJC ( MGC133160 ) |
|---|---|
| Gene Full Name: | YdjC homolog (bacterial) |
| Band: | 22q11.21 |
| Quick Links | Entrez ID:150223; OMIM: NA; Uniprot ID:YDJC_HUMAN; ENSEMBL ID: ENSG00000161179; HGNC ID: 27158 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.355952
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 13 / 564012 | 23 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 15 / 55556 | 269 |  |
| adult | 65 / 1939121 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 7 / 119369 | 58 | |
| germ cell tumor | 10 / 263845 | 37 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 29 / 95842 | 302 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 11 / 103127 | 106 | |
| lymphoma | 12 / 71755 | 167 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 72 / 3360307 | 21 | |
| ovarian tumor | 9 / 76682 | 117 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 17 / 125680 | 135 | |
| prostate cancer | 5 / 102680 | 48 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 31 / 123478 | 251 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 20 / 1100989 | 18 | |
| cervix | 10 / 48171 | 207 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 10 / 215722 | 46 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 6 / 211054 | 28 | |
| heart | 2 / 89626 | 22 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 9 / 211777 | 42 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 12 / 336974 | 35 | |
| lymph | 6 / 44270 | 135 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 15 / 102051 | 146 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 9 / 280825 | 32 | |
| prostate | 7 / 189345 | 36 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 4 / 210574 | 18 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 2 / 96619 | 20 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 5 / 16999 | 294 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_4989_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.03 ± 0.75 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.95 ± 0.33 | |
| Basal Part of Pons | 8.09 ± 0.49 | |
| Cerebellar Cortex | 7.73 ± 0.52 | |
| Cerebellar Nuclei | 8.25 ± 0.4 | |
| Claustrum | 8.38 ± 0.6 | |
| Epithalamus | 7.68 ± 0.87 | |
| Frontal Lobe | 8.02 ± 0.64 | |
| Globus Pallidus | 8.59 ± 0.67 | |
| Hypothalamus | 7.84 ± 0.58 | |
| Insula | 7.99 ± 0.59 | |
| Limbic Lobe | 8.15 ± 0.7 | |
| Mesencephalon | 8.12 ± 0.6 | |
| Myelencephalon | 8.1 ± 0.63 | |
| Occipital Lobe | 8.12 ± 0.61 | |
| Parietal Lobe | 8.04 ± 0.64 | |
| Pontine Tegmentum | 7.93 ± 0.61 | |
| Striatum | 8.42 ± 0.73 | |
| Subthalamus | 7.51 ± 0.6 | |
| Temporal Lobe | 8.04 ± 0.77 | |
| Thalamus | 8.09 ± 0.53 | |
| White Matter | 7.99 ± 0.3 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 1810015A11Rik | CB | Cerebellum | 0.61 | |
| 1.5 | | |||
| 1810015A11Rik | CTX | Cerebral cortex | 0.31 | |
| 0.45 | | |||
| 1810015A11Rik | HIP | Hippocampal region | 0.31 | |
| 0.55 | | |||
| 1810015A11Rik | HPF | Hippocampal formation | 0.31 | |
| 0.53 | | |||
| 1810015A11Rik | HY | Hypothalamus | 1 | |
| 1.11 | | |||
| 1810015A11Rik | LSX | Lateral septal complex | 0.21 | |
| 0.28 | | |||
| 1810015A11Rik | MB | Midbrain | 0.36 | |
| 0.49 | | |||
| 1810015A11Rik | MY | Medulla | 0.34 | |
| 0.49 | | |||
| 1810015A11Rik | OLF | Olfactory bulb | 0.84 | |
| 2.14 | | |||
| 1810015A11Rik | P | Pons | 0.16 | |
| 0.33 | | |||
| 1810015A11Rik | PAL | Pallidum | 0.37 | |
| 0.51 | | |||
| 1810015A11Rik | RHP | Retrohippocampal region | 0.33 | |
| 0.52 | | |||
| 1810015A11Rik | sAMY | Striatum-like amygdalar nuclei | 0.06 | |
| 0.07 | | |||
| 1810015A11Rik | STR | Striatum | 0.24 | |
| 0.3 | | |||
| 1810015A11Rik | STRd | Striatum dorsal region | 0.23 | |
| 0.34 | | |||
| 1810015A11Rik | STRv | Striatum ventral region | 0.39 | |
| 0.36 | | |||
| 1810015A11Rik | TH | Thalamus | 0.35 | |
| 0.43 | |