Annotation Detail for FAM82A1
Basic Information Top
| Gene Symbol: | FAM82A1 ( FAM82A,FLJ32954,FLJ38143,MGC33318,PRO34163,PYST9371,RMD2,RMD4 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 82, member A1 |
| Band: | 2p22.2 |
| Quick Links | Entrez ID:151393; OMIM: 611872; Uniprot ID:RMD2_HUMAN; ENSEMBL ID: ENSG00000115841; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.591566
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 8 / 564012 | 14 | |
| neonate | 2 / 31097 | 64 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 26 / 1939121 | 13 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 |  |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 40 / 3360307 | 11 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 8 / 125191 | 63 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 3 / 1100989 | 2 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 10 / 149255 | 66 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 1 / 96619 | 10 | |
| testis | 13 / 330442 | 39 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_8458_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 1.97 ± 1.1 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.47 ± 0.17 | |
| Basal Part of Pons | 1.16 ± 0.35 | |
| Cerebellar Cortex | 1.28 ± 0.67 | |
| Cerebellar Nuclei | 1.82 ± 0.89 | |
| Claustrum | 2.34 ± 0.86 | |
| Epithalamus | 1.23 ± 0.69 | |
| Frontal Lobe | 1.33 ± 0.58 | |
| Globus Pallidus | 2.05 ± 0.31 | |
| Hypothalamus | 1.75 ± 1.1 | |
| Insula | 1.4 ± 0.46 | |
| Limbic Lobe | 1.46 ± 0.58 | |
| Mesencephalon | 1.64 ± 0.66 | |
| Myelencephalon | 1.51 ± 0.65 | |
| Occipital Lobe | 1.52 ± 0.58 | |
| Parietal Lobe | 1.5 ± 0.64 | |
| Pontine Tegmentum | 1.53 ± 0.65 | |
| Striatum | 1.64 ± 0.48 | |
| Subthalamus | 1.62 ± 0.56 | |
| Temporal Lobe | 1.39 ± 0.7 | |
| Thalamus | 1.5 ± 0.63 | |
| White Matter | 2.01 ± 0.44 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| AW061290 | CB | Cerebellum | 12.99 | |
| 14.17 | | |||
| AW061290 | CTX | Cerebral cortex | 22.46 | |
| 15.34 | | |||
| AW061290 | HIP | Hippocampal region | 13.65 | |
| 12.69 | | |||
| AW061290 | HPF | Hippocampal formation | 15.3 | |
| 12.76 | | |||
| AW061290 | HY | Hypothalamus | 21.31 | |
| 15.91 | | |||
| AW061290 | LSX | Lateral septal complex | 15.23 | |
| 11.06 | | |||
| AW061290 | MB | Midbrain | 17.16 | |
| 14.91 | | |||
| AW061290 | MY | Medulla | 14.65 | |
| 14.3 | | |||
| AW061290 | OLF | Olfactory bulb | 26.96 | |
| 20.64 | | |||
| AW061290 | P | Pons | 21.18 | |
| 19.95 | | |||
| AW061290 | PAL | Pallidum | 14.32 | |
| 11.56 | | |||
| AW061290 | RHP | Retrohippocampal region | 19.12 | |
| 13.47 | | |||
| AW061290 | sAMY | Striatum-like amygdalar nuclei | 13.18 | |
| 8.36 | | |||
| AW061290 | STR | Striatum | 13.22 | |
| 8.72 | | |||
| AW061290 | STRd | Striatum dorsal region | 13.1 | |
| 8.9 | | |||
| AW061290 | STRv | Striatum ventral region | 13.23 | |
| 7.58 | | |||
| AW061290 | TH | Thalamus | 25.84 | |
| 20.67 | |