Annotation Detail for BTNL9
Basic Information Top
| Gene Symbol: | BTNL9 ( BTN3,VDLS1900 ) |
|---|---|
| Gene Full Name: | butyrophilin-like 9 |
| Band: | 5q35.3 |
| Quick Links | Entrez ID:153579; OMIM: NA; Uniprot ID:BTNL9_HUMAN; ENSEMBL ID: ENSG00000165810; HGNC ID: 24176 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.546502
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 11 / 564012 | 19 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 34 / 1939121 | 17 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 6 / 114246 | 52 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 79 / 3360307 | 23 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 |  |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 4 / 13106 | 305 |  |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 1 / 29757 | 33 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 8 / 1100989 | 7 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 4 / 211054 | 18 | |
| heart | 4 / 89626 | 44 | |
| intestine | 11 / 234472 | 46 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 2 / 24145 | 82 | |
| liver | 2 / 207743 | 9 | |
| lung | 15 / 336974 | 44 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 16 / 91610 | 174 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 7 / 53952 | 129 | |
| stomach | 2 / 96619 | 20 | |
| testis | 1 / 330442 | 3 | |
| thymus | 6 / 81131 | 73 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_32_P187951
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.8 ± 0.64 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.46 ± 1.06 | |
| Basal Part of Pons | 6.12 ± 0.48 | |
| Cerebellar Cortex | 4.47 ± 0.99 | |
| Cerebellar Nuclei | 6.08 ± 0.86 | |
| Claustrum | 4.34 ± 1 | |
| Epithalamus | 3.26 ± 0.73 | |
| Frontal Lobe | 4.89 ± 0.88 | |
| Globus Pallidus | 6.52 ± 0.58 | |
| Hypothalamus | 3.5 ± 0.43 | |
| Insula | 4.51 ± 0.79 | |
| Limbic Lobe | 5.97 ± 1.06 | |
| Mesencephalon | 4.62 ± 0.79 | |
| Myelencephalon | 4.94 ± 0.95 | |
| Occipital Lobe | 4.81 ± 0.84 | |
| Parietal Lobe | 4.66 ± 1.1 | |
| Pontine Tegmentum | 4.79 ± 1.14 | |
| Striatum | 5.56 ± 0.97 | |
| Subthalamus | 5.5 ± 0.44 | |
| Temporal Lobe | 4.89 ± 0.93 | |
| Thalamus | 5.02 ± 0.92 | |
| White Matter | 4.86 ± 0.26 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| D330012D11Rik | CB | Cerebellum | 2.15 | |
| 4.26 | | |||
| D330012D11Rik | CTX | Cerebral cortex | 0.75 | |
| 0.63 | | |||
| D330012D11Rik | HIP | Hippocampal region | 0.61 | |
| 0.84 | | |||
| D330012D11Rik | HPF | Hippocampal formation | 0.5 | |
| 0.58 | | |||
| D330012D11Rik | HY | Hypothalamus | 0.49 | |
| 0.4 | | |||
| D330012D11Rik | LSX | Lateral septal complex | 0 | |
| 0 | | |||
| D330012D11Rik | MB | Midbrain | 1.17 | |
| 1.26 | | |||
| D330012D11Rik | MY | Medulla | 1.66 | |
| 1.75 | | |||
| D330012D11Rik | OLF | Olfactory bulb | 1.18 | |
| 1.63 | | |||
| D330012D11Rik | P | Pons | 0.99 | |
| 0.94 | | |||
| D330012D11Rik | PAL | Pallidum | 0.41 | |
| 0.4 | | |||
| D330012D11Rik | RHP | Retrohippocampal region | 0.26 | |
| 0.24 | | |||
| D330012D11Rik | sAMY | Striatum-like amygdalar nuclei | 0.26 | |
| 0.22 | | |||
| D330012D11Rik | STR | Striatum | 0.44 | |
| 0.45 | | |||
| D330012D11Rik | STRd | Striatum dorsal region | 0.28 | |
| 0.31 | | |||
| D330012D11Rik | STRv | Striatum ventral region | 1.16 | |
| 1.04 | | |||
| D330012D11Rik | TH | Thalamus | 2.71 | |
| 3.33 | |