Annotation Detail for AMOT
Basic Information Top
| Gene Symbol: | AMOT ( KIAA1071 ) |
|---|---|
| Gene Full Name: | angiomotin |
| Band: | Xq23 |
| Quick Links | Entrez ID:154796; OMIM: 300410; Uniprot ID:AMOT_HUMAN; ENSEMBL ID: ENSG00000126016; HGNC ID: 17810 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.528051
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 30 / 564012 | 53 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 |  |
| juvenile | 0 / 55556 | 0 | |
| adult | 65 / 1939121 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 4 / 94178 | 42 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 6 / 68959 | 87 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 5 / 97250 | 51 | |
| normal | 100 / 3360307 | 29 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 5 / 90257 | 55 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 29 / 1100989 | 26 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 7 / 89626 | 78 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 13 / 211777 | 61 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 4 / 336974 | 11 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 |  |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 6 / 67052 | 89 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 16 / 280825 | 56 | |
| prostate | 7 / 189345 | 36 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 6 / 210574 | 28 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 8 / 330442 | 24 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 10 / 232878 | 42 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 209521_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 6.4 | |
| Adipocyte | 5.4 | |
| AdrenalCortex | 5.65 | |
| Adrenalgland | 4.5 | |
| Amygdala | 5.75 | |
| Appendix | 5.55 | |
| AtrioventricularNode | 4.1 | |
| BDCA4+_DentriticCells | 6.05 | |
| Bonemarrow | 5.35 | |
| BronchialEpithelialCells | 5.35 | |
| CD105+_Endothelial | 5.45 | |
| CD14+_Monocytes | 5.8 | |
| CD19+_BCells(neg._sel.) | 5.85 | |
| CD33+_Myeloid | 7.05 | |
| CD34+ | 6.95 | |
| CD4+_Tcells | 5.95 | |
| CD56+_NKCells | 6.5 | |
| CD71+_EarlyErythroid | 5 | |
| CD8+_Tcells | 5.3 | |
| CardiacMyocytes | 6.9 | |
| Caudatenucleus | 4.95 | |
| Cerebellum | 4.5 | |
| CerebellumPeduncles | 6.15 | |
| CiliaryGanglion | 4.25 | |
| CingulateCortex | 5.65 | |
| Colorectaladenocarcinoma | 5.4 | |
| DorsalRootGanglion | 4.15 | |
| FetalThyroid | 5.3 | |
| Fetalbrain | 5.45 | |
| Fetalliver | 4.7 | |
| Fetallung | 4.5 | |
| GlobusPallidus | 4.1 | |
| Heart | 6.85 | |
| Hypothalamus | 6 | |
| Kidney | 4.35 | |
| Leukemia_chronicMyelogenousK-562 | 4.9 | |
| Leukemia_promyelocytic-HL-60 | 4.85 | |
| Leukemialymphoblastic(MOLT-4) | 4.4 | |
| Liver | 7.15 | |
| Lung | 6.05 | |
| Lymphnode | 4.65 | |
| Lymphoma_burkitts(Daudi) | 6.9 | |
| Lymphoma_burkitts(Raji) | 7.5 | |
| MedullaOblongata | 5 | |
| OccipitalLobe | 4.85 | |
| OlfactoryBulb | 4.25 | |
| Ovary | 3.55 | |
| Pancreas | 4.95 | |
| PancreaticIslet | 5.8 | |
| ParietalLobe | 5.95 | |
| Pituitary | 10.15 | |
| Placenta | 5.7 | |
| Pons | 6.35 | |
| PrefrontalCortex | 6.85 | |
| Prostate | 6.35 | |
| Salivarygland | 4.3 | |
| SkeletalMuscle | 7.25 | |
| Skin | 4.1 | |
| SmoothMuscle | 6.2 | |
| Spinalcord | 15.95 | |
| SubthalamicNucleus | 4.9 | |
| SuperiorCervicalGanglion | 12.95 | |
| TemporalLobe | 5.9 | |
| Testis | 4.8 | |
| TestisGermCell | 4.7 | |
| TestisIntersitial | 5.4 | |
| TestisLeydigCell | 5.4 | |
| TestisSeminiferousTubule | 4.7 | |
| Thalamus | 5.65 | |
| Thymus | 4.35 | |
| Thyroid | 6.85 | |
| Tongue | 5.65 | |
| Tonsil | 5.3 | |
| Trachea | 4.55 | |
| TrigeminalGanglion | 14.15 | |
| Uterus | 4.5 | |
| UterusCorpus | 4.9 | |
| WholeBlood | 5.95 | |
| Wholebrain | 4.7 | |
| colon | 5.5 | |
| pineal_day | 6.86 | |
| pineal_night | 6.62 | |
| retina | 6.6 | |
| small_intestine | 5.3 | |
- Probe name: CUST_11710_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.01 ± 0.6 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.68 ± 0.41 | |
| Basal Part of Pons | 4.26 ± 0.39 | |
| Cerebellar Cortex | 4.09 ± 0.45 | |
| Cerebellar Nuclei | 4.45 ± 0.42 | |
| Claustrum | 4.84 ± 0.93 | |
| Epithalamus | 4.83 ± 0.71 | |
| Frontal Lobe | 4.48 ± 0.45 | |
| Globus Pallidus | 5.67 ± 0.43 | |
| Hypothalamus | 4.56 ± 0.65 | |
| Insula | 4.54 ± 0.31 | |
| Limbic Lobe | 4.59 ± 0.52 | |
| Mesencephalon | 4.68 ± 0.6 | |
| Myelencephalon | 4.67 ± 0.58 | |
| Occipital Lobe | 4.84 ± 0.55 | |
| Parietal Lobe | 4.67 ± 0.56 | |
| Pontine Tegmentum | 4.7 ± 0.52 | |
| Striatum | 5.07 ± 0.47 | |
| Subthalamus | 4.01 ± 0.19 | |
| Temporal Lobe | 4.46 ± 0.51 | |
| Thalamus | 4.79 ± 0.43 | |
| White Matter | 4.46 ± 0.33 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Amot | CB | Cerebellum | 14.84 | |
| 19.86 | | |||
| Amot | CTX | Cerebral cortex | 1.68 | |
| 1.84 | | |||
| Amot | HIP | Hippocampal region | 4.16 | |
| 4.57 | | |||
| Amot | HPF | Hippocampal formation | 3.11 | |
| 3.06 | | |||
| Amot | HY | Hypothalamus | 0.43 | |
| 0.46 | | |||
| Amot | LSX | Lateral septal complex | 0.76 | |
| 0.63 | | |||
| Amot | MB | Midbrain | 0.86 | |
| 1.29 | | |||
| Amot | MY | Medulla | 3.56 | |
| 4.1 | | |||
| Amot | OLF | Olfactory bulb | 6.85 | |
| 5.77 | | |||
| Amot | P | Pons | 1.7 | |
| 1.91 | | |||
| Amot | PAL | Pallidum | 1.02 | |
| 1.3 | | |||
| Amot | RHP | Retrohippocampal region | 1.81 | |
| 1.34 | | |||
| Amot | sAMY | Striatum-like amygdalar nuclei | 1.68 | |
| 1.44 | | |||
| Amot | STR | Striatum | 0.94 | |
| 0.91 | | |||
| Amot | STRd | Striatum dorsal region | 0.68 | |
| 0.73 | | |||
| Amot | STRv | Striatum ventral region | 1.17 | |
| 0.86 | | |||
| Amot | TH | Thalamus | 0.94 | |
| 0.94 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00496752 | 20 | 298 | 317 | DTTVISHSPNTSYDTALEAR | Peptide Atlas |