Annotation Detail for CDCA2
Basic Information Top
| Gene Symbol: | CDCA2 ( FLJ25804,MGC129906,MGC129907,Repo-Man ) |
|---|---|
| Gene Full Name: | cell division cycle associated 2 |
| Band: | 8p21.2 |
| Quick Links | Entrez ID:157313; OMIM: NA; Uniprot ID:CDCA2_HUMAN; ENSEMBL ID: ENSG00000184661; HGNC ID: 14623 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.33366
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 4 / 62319 | 64 |  |
| fetus | 21 / 564012 | 37 | |
| neonate | 2 / 31097 | 64 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 34 / 1939121 | 17 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 9 / 82823 | 108 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 66 / 3360307 | 19 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 2 / 48801 | 40 | |
| brain | 6 / 1100989 | 5 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 2 / 211054 | 9 | |
| heart | 0 / 89626 | 0 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 8 / 207743 | 38 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 8 / 91610 | 87 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 6 / 210574 | 28 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 5 / 96619 | 51 | |
| testis | 37 / 330442 | 111 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_24_P323434
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.12 ± 0.93 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.74 ± 0.21 | |
| Basal Part of Pons | 1.43 ± 0.39 | |
| Cerebellar Cortex | 1.56 ± 0.67 | |
| Cerebellar Nuclei | 2.04 ± 0.71 | |
| Claustrum | 2.56 ± 0.84 | |
| Epithalamus | 1.49 ± 0.55 | |
| Frontal Lobe | 1.57 ± 0.6 | |
| Globus Pallidus | 2.25 ± 0.28 | |
| Hypothalamus | 1.74 ± 0.66 | |
| Insula | 1.64 ± 0.45 | |
| Limbic Lobe | 1.82 ± 0.72 | |
| Mesencephalon | 1.93 ± 0.72 | |
| Myelencephalon | 1.78 ± 0.61 | |
| Occipital Lobe | 1.82 ± 0.58 | |
| Parietal Lobe | 1.76 ± 0.67 | |
| Pontine Tegmentum | 1.84 ± 0.69 | |
| Striatum | 1.94 ± 0.52 | |
| Subthalamus | 1.88 ± 0.61 | |
| Temporal Lobe | 1.65 ± 0.65 | |
| Thalamus | 1.7 ± 0.56 | |
| White Matter | 2.2 ± 0.5 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Cdca2 | CB | Cerebellum | 0.99 | |
| 1.16 | | |||
| Cdca2 | CTX | Cerebral cortex | 1.33 | |
| 1.18 | | |||
| Cdca2 | HIP | Hippocampal region | 1 | |
| 0.89 | | |||
| Cdca2 | HPF | Hippocampal formation | 1.91 | |
| 1.72 | | |||
| Cdca2 | HY | Hypothalamus | 0.22 | |
| 0.25 | | |||
| Cdca2 | LSX | Lateral septal complex | 0.86 | |
| 0.97 | | |||
| Cdca2 | MB | Midbrain | 0.19 | |
| 0.34 | | |||
| Cdca2 | MY | Medulla | 0.37 | |
| 0.53 | | |||
| Cdca2 | OLF | Olfactory bulb | 1.97 | |
| 2.4 | | |||
| Cdca2 | P | Pons | 0.21 | |
| 0.25 | | |||
| Cdca2 | PAL | Pallidum | 0.18 | |
| 0.21 | | |||
| Cdca2 | RHP | Retrohippocampal region | 3.42 | |
| 2.81 | | |||
| Cdca2 | sAMY | Striatum-like amygdalar nuclei | 0.21 | |
| 0.16 | | |||
| Cdca2 | STR | Striatum | 0.47 | |
| 0.47 | | |||
| Cdca2 | STRd | Striatum dorsal region | 0.39 | |
| 0.43 | | |||
| Cdca2 | STRv | Striatum ventral region | 0.5 | |
| 0.41 | | |||
| Cdca2 | TH | Thalamus | 0.19 | |
| 0.31 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| CDCA2_HUMAN_286 | 24 | 286 | 309 | GSSDAVSPDTFTAEVSSDAVPDVR | PRIDE |
| PAp00519350 | 27 | 425 | 451 | DFSGLSSLLLEQSPVPEPLPQPDFDDK | Peptide Atlas |