Annotation Detail for ESCO2
Basic Information Top
| Gene Symbol: | ESCO2 ( 2410004I17Rik,EFO2,RBS ) |
|---|---|
| Gene Full Name: | establishment of cohesion 1 homolog 2 (S. cerevisiae) |
| Band: | 8p21.1 |
| Quick Links | Entrez ID:157570; OMIM: 609353; Uniprot ID:ESCO2_HUMAN; ENSEMBL ID: ENSG00000171320; HGNC ID: 27230 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.99480
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 13 / 564012 | 23 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 20 / 1939121 | 10 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 3 / 17475 | 171 |  |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 2 / 263845 | 7 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 42 / 3360307 | 12 | |
| ovarian tumor | 8 / 76682 | 104 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 4 / 29757 | 134 | |
| blood | 1 / 123478 | 8 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 4 / 1100989 | 3 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 0 / 89626 | 0 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 2 / 336974 | 5 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 13 / 91610 | 141 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 2 / 20155 | 99 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 13 / 330442 | 39 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_13150_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.08 ± 0.97 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 1.41 ± 0.2 | |
| Basal Part of Pons | 1.4 ± 0.45 | |
| Cerebellar Cortex | 1.49 ± 0.76 | |
| Cerebellar Nuclei | 1.93 ± 0.7 | |
| Claustrum | 2.46 ± 1.01 | |
| Epithalamus | 1.36 ± 0.86 | |
| Frontal Lobe | 1.57 ± 0.75 | |
| Globus Pallidus | 2.22 ± 0.31 | |
| Hypothalamus | 1.55 ± 0.68 | |
| Insula | 1.29 ± 0.41 | |
| Limbic Lobe | 1.75 ± 0.71 | |
| Mesencephalon | 1.85 ± 0.8 | |
| Myelencephalon | 1.62 ± 0.69 | |
| Occipital Lobe | 1.55 ± 0.61 | |
| Parietal Lobe | 1.71 ± 0.81 | |
| Pontine Tegmentum | 1.68 ± 0.77 | |
| Striatum | 1.71 ± 0.5 | |
| Subthalamus | 2.13 ± 1.03 | |
| Temporal Lobe | 1.57 ± 0.77 | |
| Thalamus | 1.56 ± 0.66 | |
| White Matter | 2.84 ± 0.99 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Esco2 | CB | Cerebellum | 3.22 | |
| 4.17 | | |||
| Esco2 | CTX | Cerebral cortex | 9.46 | |
| 6.66 | | |||
| Esco2 | HIP | Hippocampal region | 7.15 | |
| 6.23 | | |||
| Esco2 | HPF | Hippocampal formation | 6.6 | |
| 5.28 | | |||
| Esco2 | HY | Hypothalamus | 4.03 | |
| 3.76 | | |||
| Esco2 | LSX | Lateral septal complex | 0.21 | |
| 0.14 | | |||
| Esco2 | MB | Midbrain | 5.76 | |
| 6.77 | | |||
| Esco2 | MY | Medulla | 4.58 | |
| 5.22 | | |||
| Esco2 | OLF | Olfactory bulb | 5.79 | |
| 5.18 | | |||
| Esco2 | P | Pons | 6.59 | |
| 9.57 | | |||
| Esco2 | PAL | Pallidum | 4.93 | |
| 4.01 | | |||
| Esco2 | RHP | Retrohippocampal region | 4.96 | |
| 3.52 | | |||
| Esco2 | sAMY | Striatum-like amygdalar nuclei | 8.15 | |
| 5.01 | | |||
| Esco2 | STR | Striatum | 5.81 | |
| 4.23 | | |||
| Esco2 | STRd | Striatum dorsal region | 6.39 | |
| 4.74 | | |||
| Esco2 | STRv | Striatum ventral region | 4.21 | |
| 3.03 | | |||
| Esco2 | TH | Thalamus | 7.8 | |
| 6.32 | |