Annotation Detail for FBXO16
Basic Information Top
| Gene Symbol: | FBXO16 ( FBX16,MGC125923,MGC125924,MGC125925 ) |
|---|---|
| Gene Full Name: | F-box protein 16 |
| Band: | 8p21.1 |
| Quick Links | Entrez ID:157574; OMIM: 608519; Uniprot ID:FBX16_HUMAN; ENSEMBL ID: ENSG00000214050; HGNC ID: 13618 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.659190
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 |  |
| adult | 13 / 1939121 | 6 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 25 / 3360307 | 7 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 6 / 1100989 | 5 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 1 / 16585 | 60 |  |
| placenta | 0 / 280825 | 0 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_1020_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.13 ± 0.82 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.96 ± 0.47 | |
| Basal Part of Pons | 4.55 ± 0.37 | |
| Cerebellar Cortex | 4.25 ± 0.31 | |
| Cerebellar Nuclei | 3.96 ± 0.56 | |
| Claustrum | 3.95 ± 0.96 | |
| Epithalamus | 3.8 ± 0.54 | |
| Frontal Lobe | 4.1 ± 0.55 | |
| Globus Pallidus | 2.76 ± 1 | |
| Hypothalamus | 4.05 ± 0.65 | |
| Insula | 4.25 ± 0.53 | |
| Limbic Lobe | 3.87 ± 0.67 | |
| Mesencephalon | 4.08 ± 0.75 | |
| Myelencephalon | 3.95 ± 0.67 | |
| Occipital Lobe | 3.76 ± 0.69 | |
| Parietal Lobe | 4.17 ± 0.64 | |
| Pontine Tegmentum | 3.99 ± 0.67 | |
| Striatum | 3.89 ± 0.61 | |
| Subthalamus | 3.95 ± 0.35 | |
| Temporal Lobe | 4.09 ± 0.54 | |
| Thalamus | 3.85 ± 0.56 | |
| White Matter | 2.19 ± 0.47 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Fbxo16 | CB | Cerebellum | 1.47 | |
| 2.06 | | |||
| Fbxo16 | CTX | Cerebral cortex | 5.62 | |
| 4.03 | | |||
| Fbxo16 | HIP | Hippocampal region | 2.6 | |
| 2.62 | | |||
| Fbxo16 | HPF | Hippocampal formation | 3.19 | |
| 2.82 | | |||
| Fbxo16 | HY | Hypothalamus | 0.49 | |
| 0.31 | | |||
| Fbxo16 | LSX | Lateral septal complex | 0.16 | |
| 0.1 | | |||
| Fbxo16 | MB | Midbrain | 0.86 | |
| 0.91 | | |||
| Fbxo16 | MY | Medulla | 4.96 | |
| 5.05 | | |||
| Fbxo16 | OLF | Olfactory bulb | 6.78 | |
| 5.47 | | |||
| Fbxo16 | P | Pons | 2.13 | |
| 2.47 | | |||
| Fbxo16 | PAL | Pallidum | 1.51 | |
| 1.26 | | |||
| Fbxo16 | RHP | Retrohippocampal region | 4.15 | |
| 2.94 | | |||
| Fbxo16 | sAMY | Striatum-like amygdalar nuclei | 10.49 | |
| 6.93 | | |||
| Fbxo16 | STR | Striatum | 2.39 | |
| 1.62 | | |||
| Fbxo16 | STRd | Striatum dorsal region | 1.71 | |
| 1.19 | | |||
| Fbxo16 | STRv | Striatum ventral region | 1.36 | |
| 0.87 | | |||
| Fbxo16 | TH | Thalamus | 0.79 | |
| 0.72 | |