Annotation Detail for SPRED1
Basic Information Top
| Gene Symbol: | SPRED1 ( FLJ33903,NFLS ) |
|---|---|
| Gene Full Name: | sprouty-related, EVH1 domain containing 1 |
| Band: | 15q14 |
| Quick Links | Entrez ID:161742; OMIM: 609291; Uniprot ID:SPRE1_HUMAN; ENSEMBL ID: ENSG00000166068; HGNC ID: 20249 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.525781
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 3 / 62319 | 48 |  |
| fetus | 24 / 564012 | 42 | |
| neonate | 5 / 31097 | 160 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 48 / 1939121 | 24 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 11 / 114246 | 96 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 7 / 263845 | 26 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 9 / 136302 | 66 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 1 / 103127 | 9 |  |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 102 / 3360307 | 30 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 1 / 29757 | 33 | |
| blood | 4 / 123478 | 32 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 40 / 1100989 | 36 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 3 / 16212 | 185 | |
| embryonic tissue | 14 / 215722 | 64 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 0 / 211054 | 0 | |
| heart | 1 / 89626 | 11 | |
| intestine | 11 / 234472 | 46 | |
| kidney | 9 / 211777 | 42 | |
| larynx | 1 / 24145 | 41 | |
| liver | 4 / 207743 | 19 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 3 / 41328 | 72 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 7 / 210574 | 33 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 1 / 96619 | 10 | |
| testis | 5 / 330442 | 15 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 4 / 52413 | 76 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 11 / 232878 | 47 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: A_23_P54460
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.01 ± 0.32 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.19 ± 0.35 | |
| Basal Part of Pons | 6.47 ± 0.5 | |
| Cerebellar Cortex | 6.45 ± 0.5 | |
| Cerebellar Nuclei | 6.92 ± 0.27 | |
| Claustrum | 6.56 ± 0.73 | |
| Epithalamus | 6.44 ± 0.58 | |
| Frontal Lobe | 6.93 ± 0.37 | |
| Globus Pallidus | 7.04 ± 0.36 | |
| Hypothalamus | 6.47 ± 0.46 | |
| Insula | 7.09 ± 0.23 | |
| Limbic Lobe | 6.89 ± 0.46 | |
| Mesencephalon | 6.9 ± 0.51 | |
| Myelencephalon | 6.86 ± 0.53 | |
| Occipital Lobe | 6.56 ± 0.4 | |
| Parietal Lobe | 6.79 ± 0.46 | |
| Pontine Tegmentum | 7 ± 0.42 | |
| Striatum | 7.4 ± 0.32 | |
| Subthalamus | 6.82 ± 0.1 | |
| Temporal Lobe | 7.12 ± 0.46 | |
| Thalamus | 6.92 ± 0.54 | |
| White Matter | 7.33 ± 0.26 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Spred1 | CB | Cerebellum | 31.69 | |
| 36.64 | | |||
| Spred1 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Spred1 | HIP | Hippocampal region | 44.28 | |
| 66.05 | | |||
| Spred1 | HPF | Hippocampal formation | 63.77 | |
| 73.97 | | |||
| Spred1 | HY | Hypothalamus | 42.85 | |
| 34.53 | | |||
| Spred1 | LSX | Lateral septal complex | 53 | |
| 42.46 | | |||
| Spred1 | MB | Midbrain | 60.92 | |
| 51.97 | | |||
| Spred1 | MY | Medulla | 41.07 | |
| 39.39 | | |||
| Spred1 | OLF | Olfactory bulb | 91.98 | |
| 95.93 | | |||
| Spred1 | P | Pons | 44.82 | |
| 44.05 | | |||
| Spred1 | PAL | Pallidum | 42.53 | |
| 35.45 | | |||
| Spred1 | RHP | Retrohippocampal region | 88.14 | |
| 81.09 | | |||
| Spred1 | sAMY | Striatum-like amygdalar nuclei | 71.83 | |
| 56.52 | | |||
| Spred1 | STR | Striatum | 100 | |
| 100 | | |||
| Spred1 | STRd | Striatum dorsal region | 100 | |
| 100 | | |||
| Spred1 | STRv | Striatum ventral region | 100 | |
| 92.95 | | |||
| Spred1 | TH | Thalamus | 30.79 | |
| 25.42 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| SPRE1_HUMAN_2 | 15 | 2 | 16 | SEETATSDNDNSYAR | PRIDE |