AutismKB 2.0

Annotation Detail for ZNF540


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Basic Information Top
Gene Symbol:ZNF540 ( DKFZp313K2238,DKFZp547B0714,FLJ16004,Nbla10512 )
Gene Full Name: zinc finger protein 540
Band: 19q13.13
Quick LinksEntrez ID:163255; OMIM: NA; Uniprot ID:ZN540_HUMAN; ENSEMBL ID: ENSG00000171817; HGNC ID: 25331
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_10537_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.6 ± 0.32
Basal Forebrain7.6 ± 0.33
Basal Part of Pons7.67 ± 0.27
Cerebellar Cortex7.9 ± 0.16
Cerebellar Nuclei7.46 ± 0.37
Claustrum7.48 ± 0.54
Epithalamus7.26 ± 0.47
Frontal Lobe7.59 ± 0.35
Globus Pallidus6.75 ± 0.32
Hypothalamus7.98 ± 0.38
Insula7.78 ± 0.22
Limbic Lobe7.56 ± 0.46
Mesencephalon7.49 ± 0.45
Myelencephalon7.51 ± 0.46
Occipital Lobe7.58 ± 0.35
Parietal Lobe7.7 ± 0.37
Pontine Tegmentum7.61 ± 0.35
Striatum7.18 ± 0.41
Subthalamus7.72 ± 0.54
Temporal Lobe7.7 ± 0.3
Thalamus7.42 ± 0.3
White Matter6.8 ± 0.4
Mouse Brain ISH
Peptide Top

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018