Annotation Detail for DCTD
Basic Information Top
| Gene Symbol: | DCTD ( MGC111062 ) |
|---|---|
| Gene Full Name: | dCMP deaminase |
| Band: | 4q35.1 |
| Quick Links | Entrez ID:1635; OMIM: 607638; Uniprot ID:DCTD_HUMAN; ENSEMBL ID: ENSG00000129187; HGNC ID: 2710 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.183850
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 6 / 70761 | 84 |  |
| blastocyst | 4 / 62319 | 64 | |
| fetus | 43 / 564012 | 76 | |
| neonate | 4 / 31097 | 128 | |
| infant | 1 / 23620 | 42 |  |
| juvenile | 1 / 55556 | 17 | |
| adult | 186 / 1939121 | 95 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 18 / 94178 | 191 | |
| cervical tumor | 8 / 34366 | 232 |  |
| chondrosarcoma | 12 / 82823 | 144 | |
| colorectal tumor | 12 / 114246 | 105 | |
| esophageal tumor | 6 / 17290 | 347 | |
| gastrointestinal tumor | 17 / 119369 | 142 | |
| germ cell tumor | 11 / 263845 | 41 | |
| glioma | 14 / 106883 | 130 | |
| head and neck tumor | 5 / 136302 | 36 | |
| kidney tumor | 6 / 68959 | 87 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 11 / 96359 | 114 | |
| lung tumor | 7 / 103127 | 67 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 16 / 97250 | 164 | |
| normal | 255 / 3360307 | 75 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 16 / 104616 | 152 | |
| primitive neuroectodermal tumor of the CNS | 14 / 125680 | 111 | |
| prostate cancer | 14 / 102680 | 136 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 9 / 124949 | 72 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 13 / 90257 | 144 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 7 / 33197 | 210 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 0 / 29757 | 0 | |
| blood | 9 / 123478 | 72 | |
| bone | 15 / 71655 | 209 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 68 / 1100989 | 61 | |
| cervix | 11 / 48171 | 228 | |
| connective tissue | 19 / 149255 | 127 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 19 / 215722 | 88 | |
| esophagus | 6 / 20209 | 296 | |
| eye | 25 / 211054 | 118 | |
| heart | 11 / 89626 | 122 | |
| intestine | 21 / 234472 | 89 | |
| kidney | 18 / 211777 | 84 | |
| larynx | 0 / 24145 | 0 | |
| liver | 14 / 207743 | 67 | |
| lung | 21 / 336974 | 62 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 23 / 153271 | 150 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 23 / 214812 | 107 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 4 / 41328 | 96 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 9 / 280825 | 32 | |
| prostate | 31 / 189345 | 163 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 17 / 210574 | 80 | |
| spleen | 4 / 53952 | 74 | |
| stomach | 12 / 96619 | 124 | |
| testis | 16 / 330442 | 48 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 5 / 47473 | 105 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 2 / 13680 | 146 | |
| uterus | 25 / 232878 | 107 | |
| vascular | 3 / 51780 | 57 | |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 201571_s_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 132.3 | |
| Adipocyte | 24.7 | |
| AdrenalCortex | 5.7 |  |
| Adrenalgland | 12.2 | |
| Amygdala | 15.5 | |
| Appendix | 5.4 | |
| AtrioventricularNode | 4.1 | |
| BDCA4+_DentriticCells | 53.9 | |
| Bonemarrow | 4.8 | |
| BronchialEpithelialCells | 40.2 | |
| CD105+_Endothelial | 5.55 | |
| CD14+_Monocytes | 17.45 | |
| CD19+_BCells(neg._sel.) | 35.65 | |
| CD33+_Myeloid | 20.25 | |
| CD34+ | 24.85 | |
| CD4+_Tcells | 44.25 | |
| CD56+_NKCells | 23.85 | |
| CD71+_EarlyErythroid | 4.3 | |
| CD8+_Tcells | 24.6 | |
| CardiacMyocytes | 22.9 | |
| Caudatenucleus | 4.75 | |
| Cerebellum | 4.05 | |
| CerebellumPeduncles | 5.4 | |
| CiliaryGanglion | 3.65 | |
| CingulateCortex | 5 | |
| Colorectaladenocarcinoma | 35.1 | |
| DorsalRootGanglion | 4.15 | |
| FetalThyroid | 5.1 | |
| Fetalbrain | 4.9 | |
| Fetalliver | 9.1 | |
| Fetallung | 4.8 | |
| GlobusPallidus | 4.15 | |
| Heart | 9.8 | |
| Hypothalamus | 5.9 | |
| Kidney | 6.85 | |
| Leukemia_chronicMyelogenousK-562 | 6.3 | |
| Leukemia_promyelocytic-HL-60 | 21.2 | |
| Leukemialymphoblastic(MOLT-4) | 11 | |
| Liver | 32.65 | |
| Lung | 43.2 | |
| Lymphnode | 5.65 | |
| Lymphoma_burkitts(Daudi) | 6.45 | |
| Lymphoma_burkitts(Raji) | 18.6 | |
| MedullaOblongata | 4.6 | |
| OccipitalLobe | 4.85 | |
| OlfactoryBulb | 5 | |
| Ovary | 3.6 | |
| Pancreas | 4.45 | |
| PancreaticIslet | 16.9 | |
| ParietalLobe | 5.65 | |
| Pituitary | 9 | |
| Placenta | 10.9 | |
| Pons | 5.1 | |
| PrefrontalCortex | 5.9 | |
| Prostate | 19.7 | |
| Salivarygland | 4.3 | |
| SkeletalMuscle | 6.2 | |
| Skin | 4.15 | |
| SmoothMuscle | 49.2 | |
| Spinalcord | 5.3 | |
| SubthalamicNucleus | 4.9 | |
| SuperiorCervicalGanglion | 6.1 | |
| TemporalLobe | 4.9 | |
| Testis | 5.25 | |
| TestisGermCell | 4.55 | |
| TestisIntersitial | 3.95 | |
| TestisLeydigCell | 4.6 | |
| TestisSeminiferousTubule | 4.5 | |
| Thalamus | 4.85 | |
| Thymus | 8.85 | |
| Thyroid | 71.2 | |
| Tongue | 5.3 | |
| Tonsil | 5.35 | |
| Trachea | 4.55 | |
| TrigeminalGanglion | 5.35 | |
| Uterus | 7.1 | |
| UterusCorpus | 4.9 | |
| WholeBlood | 5.45 | |
| Wholebrain | 15.65 | |
| colon | 14.2 | |
| pineal_day | 6.54 | |
| pineal_night | 6.14 | |
| retina | 13.85 | |
| small_intestine | 14.8 | |
- Probe name: A_24_P345948
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.14 ± 0.29 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.02 ± 0.16 | |
| Basal Part of Pons | 7.25 ± 0.23 | |
| Cerebellar Cortex | 6.78 ± 0.18 | |
| Cerebellar Nuclei | 7.2 ± 0.29 | |
| Claustrum | 6.75 ± 0.45 | |
| Epithalamus | 7.18 ± 0.16 | |
| Frontal Lobe | 7.2 ± 0.3 | |
| Globus Pallidus | 7.49 ± 0.39 | |
| Hypothalamus | 7.52 ± 0.24 | |
| Insula | 7.28 ± 0.23 | |
| Limbic Lobe | 7.04 ± 0.39 | |
| Mesencephalon | 7.07 ± 0.32 | |
| Myelencephalon | 7.07 ± 0.41 | |
| Occipital Lobe | 6.63 ± 0.41 | |
| Parietal Lobe | 7.13 ± 0.34 | |
| Pontine Tegmentum | 7.02 ± 0.28 | |
| Striatum | 7 ± 0.35 | |
| Subthalamus | 7.36 ± 0.47 | |
| Temporal Lobe | 7.25 ± 0.33 | |
| Thalamus | 6.9 ± 0.31 | |
| White Matter | 7.15 ± 0.08 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Dctd | CB | Cerebellum | 4.06 | |
| 4.16 | | |||
| Dctd | CTX | Cerebral cortex | 1.79 | |
| 1.33 | | |||
| Dctd | HIP | Hippocampal region | 3.06 | |
| 2.8 | | |||
| Dctd | HPF | Hippocampal formation | 3.72 | |
| 3.24 | | |||
| Dctd | HY | Hypothalamus | 2.86 | |
| 2.33 | | |||
| Dctd | LSX | Lateral septal complex | 1.04 | |
| 0.62 | | |||
| Dctd | MB | Midbrain | 1.82 | |
| 1.96 | | |||
| Dctd | MY | Medulla | 7.17 | |
| 7.62 | | |||
| Dctd | OLF | Olfactory bulb | 3.26 | |
| 3.62 | | |||
| Dctd | P | Pons | 5.07 | |
| 6.52 | | |||
| Dctd | PAL | Pallidum | 1.47 | |
| 1.13 | | |||
| Dctd | RHP | Retrohippocampal region | 5.39 | |
| 4.41 | | |||
| Dctd | sAMY | Striatum-like amygdalar nuclei | 1.25 | |
| 1 | | |||
| Dctd | STR | Striatum | 1.04 | |
| 0.82 | | |||
| Dctd | STRd | Striatum dorsal region | 0.36 | |
| 0.24 | | |||
| Dctd | STRv | Striatum ventral region | 3.12 | |
| 2.55 | | |||
| Dctd | TH | Thalamus | 3.13 | |
| 2.69 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| DCTD_HUMAN_142 | 11 | 142 | 152 | LLFNMAGVTFR | PRIDE |
| DCTD_HUMAN_143 | 11 | 143 | 153 | LLFNMAGVTFR | PRIDE |
| DCTD_HUMAN_161 | 15 | 161 | 175 | IVIDFDSINSRPSQK | PRIDE |
| DCTD_HUMAN_2 | 8 | 2 | 9 | SEVSCKKR | PRIDE |
| DCTD_HUMAN_29 | 18 | 29 | 46 | SKDPNSQVGACIVNSENK | PRIDE |
| PAp00042538 | 18 | 30 | 47 | SKDPNSQVGACIVNSENK | Peptide Atlas |