Annotation Detail for AP1G1
Basic Information Top
| Gene Symbol: | AP1G1 ( ADTG,CLAPG1,MGC18255 ) |
|---|---|
| Gene Full Name: | adaptor-related protein complex 1, gamma 1 subunit |
| Band: | 16q22.2 |
| Quick Links | Entrez ID:164; OMIM: 603533; Uniprot ID:AP1G1_HUMAN; ENSEMBL ID: ENSG00000166747; HGNC ID: 555 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.461253
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 6 / 62319 | 96 | |
| fetus | 62 / 564012 | 109 | |
| neonate | 1 / 31097 | 32 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 169 / 1939121 | 87 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 16 / 94178 | 169 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 15 / 114246 | 131 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 11 / 119369 | 92 | |
| germ cell tumor | 40 / 263845 | 151 | |
| glioma | 8 / 106883 | 74 | |
| head and neck tumor | 14 / 136302 | 102 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 8 / 95842 | 83 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 1 / 103127 | 9 |  |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 7 / 97250 | 71 | |
| normal | 312 / 3360307 | 92 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 6 / 102680 | 58 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 8 / 125191 | 63 | |
| uterine tumor | 6 / 90257 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 2 / 29757 | 67 | |
| blood | 10 / 123478 | 80 | |
| bone | 4 / 71655 | 55 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 154 / 1100989 | 139 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 13 / 215722 | 60 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 16 / 211054 | 75 | |
| heart | 3 / 89626 | 33 | |
| intestine | 20 / 234472 | 85 | |
| kidney | 9 / 211777 | 42 | |
| larynx | 0 / 24145 | 0 | |
| liver | 9 / 207743 | 43 | |
| lung | 20 / 336974 | 59 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 14 / 91610 | 152 | |
| mammary gland | 23 / 153271 | 150 | |
| mouth | 7 / 67052 | 104 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 6 / 41328 | 145 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 26 / 280825 | 92 | |
| prostate | 8 / 189345 | 42 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 10 / 210574 | 47 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 8 / 96619 | 82 | |
| testis | 93 / 330442 | 281 |  |
| thymus | 5 / 81131 | 61 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 24 / 52413 | 457 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 25 / 232878 | 107 | |
| vascular | 4 / 51780 | 77 | |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 203350_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 15.3 | |
| Adipocyte | 6.8 | |
| AdrenalCortex | 7.2 | |
| Adrenalgland | 5.75 | |
| Amygdala | 7.3 | |
| Appendix | 7.5 | |
| AtrioventricularNode | 5.3 | |
| BDCA4+_DentriticCells | 7.75 | |
| Bonemarrow | 6.75 | |
| BronchialEpithelialCells | 6.95 | |
| CD105+_Endothelial | 6.7 | |
| CD14+_Monocytes | 7.3 | |
| CD19+_BCells(neg._sel.) | 7.5 | |
| CD33+_Myeloid | 8.85 | |
| CD34+ | 8.8 | |
| CD4+_Tcells | 7.8 | |
| CD56+_NKCells | 9.9 | |
| CD71+_EarlyErythroid | 6.25 | |
| CD8+_Tcells | 9.05 | |
| CardiacMyocytes | 8.7 | |
| Caudatenucleus | 6.1 | |
| Cerebellum | 5.4 | |
| CerebellumPeduncles | 7.75 | |
| CiliaryGanglion | 5.2 | |
| CingulateCortex | 6.85 | |
| Colorectaladenocarcinoma | 6.65 | |
| DorsalRootGanglion | 6 | |
| FetalThyroid | 6.75 | |
| Fetalbrain | 8.55 | |
| Fetalliver | 5.8 | |
| Fetallung | 5.9 | |
| GlobusPallidus | 4.9 | |
| Heart | 8.55 | |
| Hypothalamus | 7.7 | |
| Kidney | 5.5 | |
| Leukemia_chronicMyelogenousK-562 | 6.2 | |
| Leukemia_promyelocytic-HL-60 | 5.95 | |
| Leukemialymphoblastic(MOLT-4) | 5.6 | |
| Liver | 8.9 | |
| Lung | 7.5 | |
| Lymphnode | 5.75 | |
| Lymphoma_burkitts(Daudi) | 9.1 | |
| Lymphoma_burkitts(Raji) | 9.45 | |
| MedullaOblongata | 6.3 | |
| OccipitalLobe | 6.15 | |
| OlfactoryBulb | 6 | |
| Ovary | 5 | |
| Pancreas | 5.4 | |
| PancreaticIslet | 7.5 | |
| ParietalLobe | 7.25 | |
| Pituitary | 7.9 | |
| Placenta | 16.65 | |
| Pons | 6.45 | |
| PrefrontalCortex | 9.05 | |
| Prostate | 8.1 | |
| Salivarygland | 5.6 | |
| SkeletalMuscle | 7.95 | |
| Skin | 6.05 | |
| SmoothMuscle | 8.3 | |
| Spinalcord | 7.2 | |
| SubthalamicNucleus | 7.3 | |
| SuperiorCervicalGanglion | 9.25 | |
| TemporalLobe | 6.35 | |
| Testis | 32.35 | |
| TestisGermCell | 56.7 | |
| TestisIntersitial | 26.2 | |
| TestisLeydigCell | 14.2 | |
| TestisSeminiferousTubule | 24.7 | |
| Thalamus | 7.05 | |
| Thymus | 5.55 | |
| Thyroid | 8.85 | |
| Tongue | 6.65 | |
| Tonsil | 8.55 | |
| Trachea | 5.75 | |
| TrigeminalGanglion | 6.75 | |
| Uterus | 5.65 | |
| UterusCorpus | 6.05 | |
| WholeBlood | 13.85 | |
| Wholebrain | 6.55 | |
| colon | 6.85 | |
| pineal_day | 9.48 | |
| pineal_night | 12.44 | |
| retina | 8.45 | |
| small_intestine | 6.45 | |
- Probe name: A_23_P318208
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.42 ± 0.35 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.2 ± 0.2 | |
| Basal Part of Pons | 7.49 ± 0.26 | |
| Cerebellar Cortex | 7.35 ± 0.33 | |
| Cerebellar Nuclei | 7.62 ± 0.28 | |
| Claustrum | 7.77 ± 0.44 | |
| Epithalamus | 7.2 ± 0.24 | |
| Frontal Lobe | 7.35 ± 0.38 | |
| Globus Pallidus | 7.33 ± 0.33 | |
| Hypothalamus | 7.3 ± 0.26 | |
| Insula | 7.37 ± 0.14 | |
| Limbic Lobe | 7.51 ± 0.33 | |
| Mesencephalon | 7.39 ± 0.4 | |
| Myelencephalon | 7.38 ± 0.36 | |
| Occipital Lobe | 7.59 ± 0.24 | |
| Parietal Lobe | 7.44 ± 0.27 | |
| Pontine Tegmentum | 7.43 ± 0.29 | |
| Striatum | 7.36 ± 0.21 | |
| Subthalamus | 7.48 ± 0.26 | |
| Temporal Lobe | 7.33 ± 0.32 | |
| Thalamus | 7.43 ± 0.24 | |
| White Matter | 7.88 ± 0.17 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Ap1g1 | CB | Cerebellum | 28.84 | |
| 46.07 | | |||
| Ap1g1 | CTX | Cerebral cortex | 86.35 | |
| 72.9 | | |||
| Ap1g1 | HIP | Hippocampal region | 47.02 | |
| 76.3 | | |||
| Ap1g1 | HPF | Hippocampal formation | 59.71 | |
| 73.88 | | |||
| Ap1g1 | HY | Hypothalamus | 50.08 | |
| 40.68 | | |||
| Ap1g1 | LSX | Lateral septal complex | 34.54 | |
| 24.64 | | |||
| Ap1g1 | MB | Midbrain | 41.36 | |
| 40.21 | | |||
| Ap1g1 | MY | Medulla | 50.86 | |
| 61.11 | | |||
| Ap1g1 | OLF | Olfactory bulb | 76 | |
| 67.94 | | |||
| Ap1g1 | P | Pons | 45.52 | |
| 52.57 | | |||
| Ap1g1 | PAL | Pallidum | 50.82 | |
| 48.83 | | |||
| Ap1g1 | RHP | Retrohippocampal region | 83.33 | |
| 74.02 | | |||
| Ap1g1 | sAMY | Striatum-like amygdalar nuclei | 71.05 | |
| 58.15 | | |||
| Ap1g1 | STR | Striatum | 51.91 | |
| 40.05 | | |||
| Ap1g1 | STRd | Striatum dorsal region | 48.57 | |
| 37.9 | | |||
| Ap1g1 | STRv | Striatum ventral region | 64.16 | |
| 46.48 | | |||
| Ap1g1 | TH | Thalamus | 48.44 | |
| 46.41 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| AP1G1_HUMAN_204 | 9 | 204 | 212 | SPDMLAHFR | PRIDE |
| AP1G1_HUMAN_282 | 18 | 282 | 299 | NVGNAILYETVLTIMDIK | PRIDE |
| PAp00007911 | 17 | 19 | 35 | TQAEEREMIQKECAAIR | Peptide Atlas |