AutismKB 2.0

Annotation Detail for DHX9


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Basic Information Top
Gene Symbol:DHX9 ( DDX9,LKP,NDH2,NDHII,RHA )
Gene Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 9
Band: 1q25.3
Quick LinksEntrez ID:1660; OMIM: 603115; Uniprot ID:DHX9_HUMAN; ENSEMBL ID: ENSG00000135829; HGNC ID: 2750
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body19 / 70761268
blastocyst30 / 62319481
fetus132 / 564012234
neonate9 / 31097289
infant10 / 23620423
juvenile23 / 55556413
adult336 / 1939121173
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma0 / 174750 
breast (mammary gland) tumor25 / 94178265
cervical tumor15 / 34366436
chondrosarcoma6 / 8282372
colorectal tumor12 / 114246105
esophageal tumor4 / 17290231
gastrointestinal tumor23 / 119369192
germ cell tumor145 / 263845549
glioma14 / 106883130
head and neck tumor29 / 136302212
kidney tumor14 / 68959203
leukemia14 / 95842146
liver tumor22 / 96359228
lung tumor17 / 103127164
lymphoma13 / 71755181
non-neoplasia13 / 97250133
normal605 / 3360307180
ovarian tumor11 / 76682143
pancreatic tumor11 / 104616105
primitive neuroectodermal tumor of the CNS37 / 125680294
prostate cancer5 / 10268048
retinoblastoma5 / 46356107
skin tumor35 / 124949280
soft tissue/muscle tissue tumor23 / 125191183
uterine tumor16 / 90257177
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland2 / 3319760
ascites8 / 40015199
bladder4 / 29757134
blood16 / 123478129
bone3 / 7165541
bone marrow10 / 48801204
brain280 / 1100989254
cervix15 / 48171311
connective tissue10 / 14925566
ear2 / 16212123
embryonic tissue76 / 215722352
esophagus4 / 20209197
eye20 / 21105494
heart11 / 89626122
intestine34 / 234472145
kidney36 / 211777169
larynx3 / 24145124
liver34 / 207743163
lung50 / 336974148
lymph10 / 44270225
lymph node14 / 91610152
mammary gland34 / 153271221
mouth17 / 67052253
muscle20 / 107715185
nerve2 / 15768126
ovary12 / 102051117
pancreas24 / 214812111
parathyroid1 / 2053948
pharynx6 / 41328145
pituitary gland3 / 16585180
placenta42 / 280825149
prostate10 / 18934552
salivary gland0 / 201550 
skin47 / 210574223
spleen9 / 53952166
stomach12 / 96619124
testis166 / 330442502
thymus19 / 81131234
thyroid12 / 47473252
tonsil1 / 1699958
trachea26 / 52413496
umbilical cord1 / 1368073
uterus63 / 232878270
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212107_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts211.55
Adipocyte9.05
AdrenalCortex9.6
Adrenalgland6.8
Amygdala7.65
Appendix11.35
AtrioventricularNode8.65
BDCA4+_DentriticCells155.55
Bonemarrow8.5
BronchialEpithelialCells8.45
CD105+_Endothelial108.8
CD14+_Monocytes13.1
CD19+_BCells(neg._sel.)25.1
CD33+_Myeloid154.55
CD34+198.95
CD4+_Tcells125.8
CD56+_NKCells62.35
CD71+_EarlyErythroid100.1
CD8+_Tcells121.65
CardiacMyocytes44.8
Caudatenucleus6.95
Cerebellum6.85
CerebellumPeduncles13.6
CiliaryGanglion9.3
CingulateCortex8.65
Colorectaladenocarcinoma8.4
DorsalRootGanglion7.5
FetalThyroid7.9
Fetalbrain8.1
Fetalliver16.7
Fetallung6.75
GlobusPallidus7.45
Heart14.65
Hypothalamus8.35
Kidney7.55
Leukemia_chronicMyelogenousK-5626.85
Leukemia_promyelocytic-HL-607.8
Leukemialymphoblastic(MOLT-4)7.4
Liver11.85
Lung8.3
Lymphnode7.15
Lymphoma_burkitts(Daudi)9.7
Lymphoma_burkitts(Raji)12.3
MedullaOblongata6.6
OccipitalLobe7.2
OlfactoryBulb6
Ovary7.25
Pancreas6
PancreaticIslet8.25
ParietalLobe9.8
Pituitary10.15
Placenta9.1
Pons7.7
PrefrontalCortex11.25
Prostate9.45
Salivarygland6.25
SkeletalMuscle12.7
Skin7.4
SmoothMuscle9.4
Spinalcord8.3
SubthalamicNucleus8.7
SuperiorCervicalGanglion12.8
TemporalLobe7.5
Testis6.9
TestisGermCell8.7
TestisIntersitial10.05
TestisLeydigCell10.5
TestisSeminiferousTubule6.85
Thalamus8.15
Thymus8.7
Thyroid9.6
Tongue11.55
Tonsil10.2
Trachea7.05
TrigeminalGanglion13.65
Uterus8.55
UterusCorpus7.45
WholeBlood9.25
Wholebrain5.75
colon27.15
pineal_day12.78
pineal_night14.28
retina9.825
small_intestine10.3
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P808534
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.94 ± 0.51
Basal Forebrain5.92 ± 0.08
Basal Part of Pons5.83 ± 0.29
Cerebellar Cortex6 ± 0.35
Cerebellar Nuclei6 ± 0.37
Claustrum6.02 ± 0.46
Epithalamus6.12 ± 0.66
Frontal Lobe5.75 ± 0.34
Globus Pallidus6.1 ± 0.29
Hypothalamus6.03 ± 0.31
Insula5.76 ± 0.24
Limbic Lobe6 ± 0.37
Mesencephalon5.96 ± 0.35
Myelencephalon5.88 ± 0.36
Occipital Lobe6.32 ± 0.35
Parietal Lobe5.88 ± 0.36
Pontine Tegmentum6.06 ± 0.37
Striatum6.11 ± 0.39
Subthalamus5.89 ± 0.18
Temporal Lobe5.84 ± 0.33
Thalamus5.91 ± 0.36
White Matter6.64 ± 0.31
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Dhx9CBCerebellum41.54
54.95
Dhx9CTXCerebral cortex100
100
Dhx9HIPHippocampal region92.05
100
Dhx9HPFHippocampal formation98.84
100
Dhx9HYHypothalamus81.57
78.77
Dhx9LSXLateral septal complex100
100
Dhx9MBMidbrain88.57
92.11
Dhx9MYMedulla68.23
89.35
Dhx9OLFOlfactory bulb100
100
Dhx9PPons67.68
84.55
Dhx9PALPallidum75.22
80.74
Dhx9RHPRetrohippocampal region100
100
Dhx9sAMYStriatum-like amygdalar nuclei71.24
60.47
Dhx9STRStriatum93.24
78.63
Dhx9STRdStriatum dorsal region88.46
73.36
Dhx9STRvStriatum ventral region100
93.31
Dhx9THThalamus90.19
93.64
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
DHX9_HUMAN_1057 16 1057 1072 GMTLVTPLQLLLFASK PRIDE
DHX9_HUMAN_1058 16 1058 1073 GMTLVTPLQLLLFASK PRIDE
DHX9_HUMAN_1117 14 1117 1130 QPAIISQLDPVNER PRIDE
DHX9_HUMAN_1141 14 1141 1154 PSAAGINLMIGSTR PRIDE
DHX9_HUMAN_669 12 669 680 HLEMNPHFGSHR PRIDE
PAp00000145 12 435 446 AAECNIVVTQPR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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