Annotation Detail for TXLNB
Basic Information Top
| Gene Symbol: | TXLNB ( C6orf198,DKFZp451A175,LST001,MDP77,dJ522B19.2 ) |
|---|---|
| Gene Full Name: | taxilin beta |
| Band: | 6q24.1 |
| Quick Links | Entrez ID:167838; OMIM: 611438; Uniprot ID:TXLNB_HUMAN; ENSEMBL ID: ENSG00000164440; HGNC ID: 21617 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.535820
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 11 / 564012 | 19 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 23 / 1939121 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 1 / 263845 | 3 |  |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 42 / 3360307 | 12 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 5 / 1100989 | 4 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 8 / 89626 | 89 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 6 / 207743 | 28 | |
| lung | 0 / 336974 | 0 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 17 / 107715 | 157 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 6 / 330442 | 18 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_13754_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.62 ± 0.38 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.85 ± 0.64 | |
| Basal Part of Pons | 4.15 ± 0.76 | |
| Cerebellar Cortex | 3.2 ± 0.55 | |
| Cerebellar Nuclei | 3.23 ± 0.43 | |
| Claustrum | 4.11 ± 0.66 | |
| Epithalamus | 5.45 ± 0.75 | |
| Frontal Lobe | 3.85 ± 0.78 | |
| Globus Pallidus | 4.19 ± 0.84 | |
| Hypothalamus | 4.12 ± 0.82 | |
| Insula | 4.66 ± 0.4 | |
| Limbic Lobe | 4.64 ± 0.67 | |
| Mesencephalon | 4.15 ± 0.86 | |
| Myelencephalon | 4.11 ± 0.84 | |
| Occipital Lobe | 3.86 ± 0.96 | |
| Parietal Lobe | 4.19 ± 0.84 | |
| Pontine Tegmentum | 3.77 ± 0.71 | |
| Striatum | 4.11 ± 1.09 | |
| Subthalamus | 3.56 ± 0.7 | |
| Temporal Lobe | 4.38 ± 0.68 | |
| Thalamus | 3.34 ± 0.65 | |
| White Matter | 2.84 ± 1.23 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Txlnb | CB | Cerebellum | 100 | |
| 100 | | |||
| Txlnb | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Txlnb | HIP | Hippocampal region | 91.62 | |
| 100 | | |||
| Txlnb | HPF | Hippocampal formation | 91.23 | |
| 100 | | |||
| Txlnb | HY | Hypothalamus | 42.16 | |
| 34.32 | | |||
| Txlnb | LSX | Lateral septal complex | 66.83 | |
| 55.99 | | |||
| Txlnb | MB | Midbrain | 44.14 | |
| 38.5 | | |||
| Txlnb | MY | Medulla | 59 | |
| 58.64 | | |||
| Txlnb | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Txlnb | P | Pons | 44.83 | |
| 43.2 | | |||
| Txlnb | PAL | Pallidum | 52.83 | |
| 46.55 | | |||
| Txlnb | RHP | Retrohippocampal region | 91.05 | |
| 79.49 | | |||
| Txlnb | sAMY | Striatum-like amygdalar nuclei | 100 | |
| 92.26 | | |||
| Txlnb | STR | Striatum | 98.64 | |
| 76.23 | | |||
| Txlnb | STRd | Striatum dorsal region | 99.33 | |
| 74.86 | | |||
| Txlnb | STRv | Striatum ventral region | 100 | |
| 83.31 | | |||
| Txlnb | TH | Thalamus | 66.48 | |
| 56.37 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00011474 | 8 | 212 | 219 | SKLESLCR | Peptide Atlas |