Annotation Detail for GIMAP7
Basic Information Top
| Gene Symbol: | GIMAP7 ( IAN7,MGC27027,hIAN7 ) |
|---|---|
| Gene Full Name: | GTPase, IMAP family member 7 |
| Band: | 7q36.1 |
| Quick Links | Entrez ID:168537; OMIM: NA; Uniprot ID:GIMA7_HUMAN; ENSEMBL ID: ENSG00000179144; HGNC ID: 22404 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.647074
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 3 / 564012 | 5 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 21 / 1939121 | 10 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 |  |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 |  |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 58 / 3360307 | 17 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 11 / 1100989 | 9 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 1 / 89626 | 11 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 21 / 41328 | 508 |  |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 7 / 232878 | 30 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: CUST_58_PI417507815
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.49 ± 0.56 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.21 ± 0.28 | |
| Basal Part of Pons | 5.83 ± 0.33 | |
| Cerebellar Cortex | 5.82 ± 0.36 | |
| Cerebellar Nuclei | 7.02 ± 0.5 | |
| Claustrum | 5.42 ± 0.66 | |
| Epithalamus | 6.27 ± 0.53 | |
| Frontal Lobe | 6.26 ± 0.5 | |
| Globus Pallidus | 7.46 ± 0.38 | |
| Hypothalamus | 5.89 ± 0.72 | |
| Insula | 6.37 ± 0.29 | |
| Limbic Lobe | 6.08 ± 0.6 | |
| Mesencephalon | 6.5 ± 0.59 | |
| Myelencephalon | 6.38 ± 0.59 | |
| Occipital Lobe | 6.43 ± 0.55 | |
| Parietal Lobe | 5.95 ± 0.57 | |
| Pontine Tegmentum | 6.36 ± 0.61 | |
| Striatum | 7.3 ± 0.5 | |
| Subthalamus | 6.35 ± 0.5 | |
| Temporal Lobe | 6.19 ± 0.35 | |
| Thalamus | 6.51 ± 0.45 | |
| White Matter | 6.76 ± 0.75 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Gimap7 | CB | Cerebellum | 4.09 | |
| 4.22 | | |||
| Gimap7 | CTX | Cerebral cortex | 1.06 | |
| 0.91 | | |||
| Gimap7 | HIP | Hippocampal region | 1.97 | |
| 1.89 | | |||
| Gimap7 | HPF | Hippocampal formation | 1.66 | |
| 1.44 | | |||
| Gimap7 | HY | Hypothalamus | 0.17 | |
| 0.43 | | |||
| Gimap7 | LSX | Lateral septal complex | 0.38 | |
| 0.58 | | |||
| Gimap7 | MB | Midbrain | 0.57 | |
| 0.95 | | |||
| Gimap7 | MY | Medulla | 1.14 | |
| 1.3 | | |||
| Gimap7 | OLF | Olfactory bulb | 3.78 | |
| 3.06 | | |||
| Gimap7 | P | Pons | 0.74 | |
| 1.17 | | |||
| Gimap7 | PAL | Pallidum | 0.31 | |
| 0.22 | | |||
| Gimap7 | RHP | Retrohippocampal region | 1 | |
| 0.72 | | |||
| Gimap7 | sAMY | Striatum-like amygdalar nuclei | 0.22 | |
| 0.24 | | |||
| Gimap7 | STR | Striatum | 0.3 | |
| 0.23 | | |||
| Gimap7 | STRd | Striatum dorsal region | 0.24 | |
| 0.17 | | |||
| Gimap7 | STRv | Striatum ventral region | 0.48 | |
| 0.28 | | |||
| Gimap7 | TH | Thalamus | 1.51 | |
| 2.09 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| GIMA7_HUMAN_133 | 25 | 133 | 157 | KEELEGQSFHDFIADADVGLKSIVK | PRIDE |
| PAp00487365 | 16 | 22 | 37 | SATANTILGEEIFDSR | Peptide Atlas |