AutismKB 2.0

Annotation Detail for OLFML2A


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Basic Information Top
Gene Symbol:OLFML2A ( FLJ00237,PRO34319 )
Gene Full Name: olfactomedin-like 2A
Band: 9q33.3
Quick LinksEntrez ID:169611; OMIM: NA; Uniprot ID:OLM2A_HUMAN; ENSEMBL ID: ENSG00000185585; HGNC ID: 27270
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus38 / 56401267
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult49 / 193912125
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor14 / 26384553
glioma0 / 1068830 
head and neck tumor4 / 13630229
kidney tumor3 / 6895943
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor1 / 1031279
lymphoma1 / 7175513
non-neoplasia0 / 972500 
normal98 / 336030729
ovarian tumor11 / 76682143
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone4 / 7165555
bone marrow0 / 488010 
brain7 / 11009896
cervix0 / 481710 
connective tissue1 / 1492556
ear6 / 16212370
embryonic tissue4 / 21572218
esophagus1 / 2020949
eye8 / 21105437
heart11 / 89626122
intestine6 / 23447225
kidney8 / 21177737
larynx0 / 241450 
liver0 / 2077430 
lung19 / 33697456
lymph1 / 4427022
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth3 / 6705244
muscle1 / 1077159
nerve0 / 157680 
ovary12 / 102051117
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta4 / 28082514
prostate5 / 18934526
salivary gland0 / 201550 
skin4 / 21057418
spleen3 / 5395255
stomach1 / 9661910
testis11 / 33044233
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213075_at
Cell line Expression level Expression bar
721_B_lymphoblasts3.75
Adipocyte58.5
AdrenalCortex3.2
Adrenalgland3.4
Amygdala3.1
Appendix32.1
AtrioventricularNode4.45
BDCA4+_DentriticCells3.3
Bonemarrow2.9
BronchialEpithelialCells2.95
CD105+_Endothelial3
CD14+_Monocytes3.2
CD19+_BCells(neg._sel.)3.15
CD33+_Myeloid3.8
CD34+3.8
CD4+_Tcells3.25
CD56+_NKCells3.45
CD71+_EarlyErythroid2.8
CD8+_Tcells2.9
CardiacMyocytes3.65
Caudatenucleus2.7
Cerebellum2.4
CerebellumPeduncles3.35
CiliaryGanglion20.45
CingulateCortex3
Colorectaladenocarcinoma3
DorsalRootGanglion15.3
FetalThyroid14.35
Fetalbrain3
Fetalliver2.55
Fetallung36.75
GlobusPallidus2.15
Heart5.15
Hypothalamus3.25
Kidney2.8
Leukemia_chronicMyelogenousK-5622.65
Leukemia_promyelocytic-HL-602.6
Leukemialymphoblastic(MOLT-4)2.4
Liver4.55
Lung45
Lymphnode2.6
Lymphoma_burkitts(Daudi)3.75
Lymphoma_burkitts(Raji)4.05
MedullaOblongata2.7
OccipitalLobe2.65
OlfactoryBulb7.7
Ovary2.45
Pancreas2.4
PancreaticIslet3.3
ParietalLobe3.1
Pituitary5.8
Placenta3.15
Pons2.85
PrefrontalCortex3.75
Prostate4.05
Salivarygland2.95
SkeletalMuscle4.65
Skin2.35
SmoothMuscle3.35
Spinalcord5.4
SubthalamicNucleus2.7
SuperiorCervicalGanglion8.85
TemporalLobe2.7
Testis2.55
TestisGermCell2.6
TestisIntersitial2.85
TestisLeydigCell2.95
TestisSeminiferousTubule2.55
Thalamus3
Thymus3.05
Thyroid33.65
Tongue3
Tonsil2.95
Trachea3.4
TrigeminalGanglion9.15
Uterus11.65
UterusCorpus6.85
WholeBlood3.3
Wholebrain2.5
colon10.25
pineal_day4.32
pineal_night4.26
retina42.525
small_intestine3.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P100856
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.62 ± 1.04
Basal Forebrain2.32 ± 0.64
Basal Part of Pons1.8 ± 0.36
Cerebellar Cortex1.99 ± 0.57
Cerebellar Nuclei2.52 ± 0.76
Claustrum2.94 ± 0.72
Epithalamus2.13 ± 0.57
Frontal Lobe2.07 ± 0.68
Globus Pallidus2.84 ± 0.52
Hypothalamus2.16 ± 0.58
Insula2.06 ± 0.72
Limbic Lobe2.25 ± 0.69
Mesencephalon2.45 ± 0.61
Myelencephalon2.26 ± 0.67
Occipital Lobe2.46 ± 0.88
Parietal Lobe2.3 ± 0.67
Pontine Tegmentum2.33 ± 0.75
Striatum2.57 ± 0.71
Subthalamus2.49 ± 0.89
Temporal Lobe2.12 ± 0.66
Thalamus2.2 ± 0.62
White Matter2.74 ± 0.25
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Olfml2aCBCerebellum3.05
5.91
Olfml2aCTXCerebral cortex1.43
1.95
Olfml2aHIPHippocampal region0.9
1.34
Olfml2aHPFHippocampal formation0.75
1.07
Olfml2aHYHypothalamus0.41
0.67
Olfml2aLSXLateral septal complex0.2
0.2
Olfml2aMBMidbrain0.49
1.05
Olfml2aMYMedulla1.83
2.76
Olfml2aOLFOlfactory bulb1.48
1.85
Olfml2aPPons0.66
1.21
Olfml2aPALPallidum0.15
0.17
Olfml2aRHPRetrohippocampal region0.5
0.73
Olfml2asAMYStriatum-like amygdalar nuclei0.43
0.52
Olfml2aSTRStriatum0.82
1.1
Olfml2aSTRdStriatum dorsal region1.14
1.32
Olfml2aSTRvStriatum ventral region0.43
1.14
Olfml2aTHThalamus0.85
1.77
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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