Annotation Detail for QSOX2
Basic Information Top
| Gene Symbol: | QSOX2 ( DKFZp762A2013,QSCN6L1,SOXN ) |
|---|---|
| Gene Full Name: | quiescin Q6 sulfhydryl oxidase 2 |
| Band: | 9q34.3 |
| Quick Links | Entrez ID:169714; OMIM: 612860; Uniprot ID:QSOX2_HUMAN; ENSEMBL ID: ENSG00000165661; HGNC ID: 30249 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.657864
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 5 / 70761 | 70 |  |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 9 / 564012 | 15 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 21 / 1939121 | 10 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 52 / 3360307 | 15 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 7 / 1100989 | 6 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 9 / 215722 | 41 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 11 / 211054 | 52 | |
| heart | 0 / 89626 | 0 | |
| intestine | 10 / 234472 | 42 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 5 / 336974 | 14 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 5 / 210574 | 23 | |
| spleen | 4 / 53952 | 74 | |
| stomach | 0 / 96619 | 0 | |
| testis | 6 / 330442 | 18 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P263682
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.1 ± 0.69 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.95 ± 0.8 | |
| Basal Part of Pons | 3.87 ± 0.44 | |
| Cerebellar Cortex | 4.48 ± 0.31 | |
| Cerebellar Nuclei | 3.89 ± 0.6 | |
| Claustrum | 3.96 ± 0.63 | |
| Epithalamus | 4.23 ± 0.63 | |
| Frontal Lobe | 3.66 ± 0.64 | |
| Globus Pallidus | 3.57 ± 0.92 | |
| Hypothalamus | 3.79 ± 0.5 | |
| Insula | 3.85 ± 0.56 | |
| Limbic Lobe | 4.04 ± 0.62 | |
| Mesencephalon | 3.86 ± 0.58 | |
| Myelencephalon | 3.86 ± 0.6 | |
| Occipital Lobe | 4.23 ± 0.63 | |
| Parietal Lobe | 3.92 ± 0.59 | |
| Pontine Tegmentum | 3.99 ± 0.73 | |
| Striatum | 4.35 ± 0.64 | |
| Subthalamus | 4.01 ± 0.28 | |
| Temporal Lobe | 3.89 ± 0.54 | |
| Thalamus | 3.82 ± 0.58 | |
| White Matter | 3.99 ± 1.13 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Qscn6l1 | CB | Cerebellum | 20.15 | |
| 21.64 | | |||
| Qscn6l1 | CTX | Cerebral cortex | 52.52 | |
| 41.04 | | |||
| Qscn6l1 | HIP | Hippocampal region | 40.45 | |
| 68.91 | | |||
| Qscn6l1 | HPF | Hippocampal formation | 42.77 | |
| 55.12 | | |||
| Qscn6l1 | HY | Hypothalamus | 24.7 | |
| 19.82 | | |||
| Qscn6l1 | LSX | Lateral septal complex | 66.66 | |
| 51.62 | | |||
| Qscn6l1 | MB | Midbrain | 21.47 | |
| 18.46 | | |||
| Qscn6l1 | MY | Medulla | 22.81 | |
| 22.86 | | |||
| Qscn6l1 | OLF | Olfactory bulb | 66.99 | |
| 63.6 | | |||
| Qscn6l1 | P | Pons | 18.43 | |
| 18.02 | | |||
| Qscn6l1 | PAL | Pallidum | 24.21 | |
| 22.15 | | |||
| Qscn6l1 | RHP | Retrohippocampal region | 46.04 | |
| 39.86 | | |||
| Qscn6l1 | sAMY | Striatum-like amygdalar nuclei | 36.19 | |
| 26.63 | | |||
| Qscn6l1 | STR | Striatum | 50.39 | |
| 37.46 | | |||
| Qscn6l1 | STRd | Striatum dorsal region | 48.63 | |
| 35.82 | | |||
| Qscn6l1 | STRv | Striatum ventral region | 59.67 | |
| 44.68 | | |||
| Qscn6l1 | TH | Thalamus | 17.4 | |
| 15.99 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00041450 | 33 | 435 | 467 | LFHTLTVEASTHPDALVGTGFEDDPQAVLQTMR | Peptide Atlas |