AutismKB 2.0

Annotation Detail for ZNF384


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Basic Information Top
Gene Symbol:ZNF384 ( CAGH1,CAGH1A,CIZ,ERDA2,FLJ59043,NMP4,NP,TNRC1 )
Gene Full Name: zinc finger protein 384
Band: 12p13.31
Quick LinksEntrez ID:171017; OMIM: 609951; Uniprot ID:ZN384_HUMAN; ENSEMBL ID: ENSG00000126746; HGNC ID: 11955
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst9 / 62319144
fetus31 / 56401254
neonate2 / 3109764
infant0 / 236200 
juvenile3 / 5555653
adult133 / 193912168
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult0 / 19391210 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma2 / 17475114
breast (mammary gland) tumor5 / 9417853
cervical tumor2 / 3436658
chondrosarcoma6 / 8282372
colorectal tumor9 / 11424678
esophageal tumor1 / 1729057
gastrointestinal tumor11 / 11936992
germ cell tumor21 / 26384579
glioma7 / 10688365
head and neck tumor9 / 13630266
kidney tumor1 / 6895914
leukemia6 / 9584262
liver tumor15 / 96359155
lung tumor4 / 10312738
lymphoma6 / 7175583
non-neoplasia3 / 9725030
normal166 / 336030749
ovarian tumor2 / 7668226
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer1 / 1026809
retinoblastoma4 / 4635686
skin tumor6 / 12494948
soft tissue/muscle tissue tumor5 / 12519139
uterine tumor8 / 9025788
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal1 / 33603070 
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland3 / 3319790
ascites1 / 4001524
bladder1 / 2975733
blood13 / 123478105
bone2 / 7165527
bone marrow1 / 4880120
brain37 / 110098933
cervix4 / 4817183
connective tissue8 / 14925553
ear0 / 162120 
embryonic tissue17 / 21572278
esophagus1 / 2020949
eye14 / 21105466
heart1 / 8962611
intestine15 / 23447263
kidney3 / 21177714
larynx3 / 24145124
liver16 / 20774377
lung13 / 33697438
lymph1 / 4427022
lymph node7 / 9161076
mammary gland7 / 15327145
mouth2 / 6705229
muscle6 / 10771555
nerve0 / 157680 
ovary4 / 10205139
pancreas6 / 21481227
parathyroid1 / 2053948
pharynx2 / 4132848
pituitary gland0 / 165850 
placenta18 / 28082564
prostate2 / 18934510
salivary gland0 / 201550 
skin6 / 21057428
spleen0 / 539520 
stomach10 / 96619103
testis23 / 33044269
thymus10 / 81131123
thyroid2 / 4747342
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord1 / 1368073
uterus16 / 23287868
vascular2 / 5178038
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen1 / 5395218
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212369_at
Cell line Expression level Expression bar
721_B_lymphoblasts146.8
Adipocyte127.55
AdrenalCortex168.05
Adrenalgland180.8
Amygdala88.35
Appendix131.75
AtrioventricularNode101.8
BDCA4+_DentriticCells105.45
Bonemarrow172.65
BronchialEpithelialCells87.55
CD105+_Endothelial79.6
CD14+_Monocytes98.75
CD19+_BCells(neg._sel.)91.35
CD33+_Myeloid113.95
CD34+155.4
CD4+_Tcells114.8
CD56+_NKCells128.1
CD71+_EarlyErythroid151.9
CD8+_Tcells95.85
CardiacMyocytes130.6
Caudatenucleus170.55
Cerebellum182.75
CerebellumPeduncles157.1
CiliaryGanglion94.5
CingulateCortex147.55
Colorectaladenocarcinoma137.6
DorsalRootGanglion110.9
FetalThyroid138.3
Fetalbrain148.65
Fetalliver138.9
Fetallung126.7
GlobusPallidus100.1
Heart142.1
Hypothalamus147.6
Kidney159.15
Leukemia_chronicMyelogenousK-562139.95
Leukemia_promyelocytic-HL-60125.95
Leukemialymphoblastic(MOLT-4)199.3
Liver220.25
Lung142.5
Lymphnode161.9
Lymphoma_burkitts(Daudi)190
Lymphoma_burkitts(Raji)210.05
MedullaOblongata124.8
OccipitalLobe119.85
OlfactoryBulb119.9
Ovary96
Pancreas117.85
PancreaticIslet131.1
ParietalLobe143.45
Pituitary190.8
Placenta211.85
Pons129.95
PrefrontalCortex155.95
Prostate126.3
Salivarygland129.25
SkeletalMuscle170
Skin116.7
SmoothMuscle124.65
Spinalcord131.9
SubthalamicNucleus72
SuperiorCervicalGanglion188.2
TemporalLobe100.65
Testis200.6
TestisGermCell124.15
TestisIntersitial157
TestisLeydigCell137.4
TestisSeminiferousTubule212.85
Thalamus141.75
Thymus157
Thyroid146.6
Tongue140.25
Tonsil135.8
Trachea142.1
TrigeminalGanglion146.35
Uterus114.5
UterusCorpus154.55
WholeBlood134.8
Wholebrain116.1
colon106.7
pineal_day136.74
pineal_night141.8
retina139.05
small_intestine128.25
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P204355
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.36 ± 0.56
Basal Forebrain4.58 ± 0.61
Basal Part of Pons4.59 ± 0.45
Cerebellar Cortex4.91 ± 0.4
Cerebellar Nuclei4.75 ± 0.52
Claustrum4.19 ± 0.78
Epithalamus4.86 ± 0.45
Frontal Lobe4.59 ± 0.51
Globus Pallidus4.62 ± 0.26
Hypothalamus4.22 ± 0.67
Insula4.57 ± 0.34
Limbic Lobe4.35 ± 0.53
Mesencephalon4.55 ± 0.58
Myelencephalon4.57 ± 0.53
Occipital Lobe4.55 ± 0.56
Parietal Lobe4.5 ± 0.56
Pontine Tegmentum4.44 ± 0.58
Striatum4.37 ± 0.48
Subthalamus4.38 ± 0.22
Temporal Lobe4.55 ± 0.48
Thalamus4.73 ± 0.53
White Matter5.2 ± 0.48
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Zfp384CBCerebellum0.44
0.94
Zfp384CTXCerebral cortex0.18
0.25
Zfp384HIPHippocampal region0.14
0.3
Zfp384HPFHippocampal formation0.13
0.24
Zfp384HYHypothalamus0.05
0.03
Zfp384LSXLateral septal complex0.29
0.41
Zfp384MBMidbrain0.28
0.45
Zfp384MYMedulla0.16
0.38
Zfp384OLFOlfactory bulb0.2
0.28
Zfp384PPons0.4
1.11
Zfp384PALPallidum0.16
0.18
Zfp384RHPRetrohippocampal region0.1
0.14
Zfp384sAMYStriatum-like amygdalar nuclei0.02
0
Zfp384STRStriatum0.13
0.16
Zfp384STRdStriatum dorsal region0.12
0.16
Zfp384STRvStriatum ventral region0.16
0.15
Zfp384THThalamus0.15
0.31
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00079845 25 152 176 VASTLTEEGGGGGGGGGSVAPKPPR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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