Annotation Detail for POLR3H
Basic Information Top
| Gene Symbol: | POLR3H ( KIAA1665,MGC111097,MGC29654,RPC22.9,RPC8 ) |
|---|---|
| Gene Full Name: | polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) |
| Band: | 22q13.2 |
| Quick Links | Entrez ID:171568; OMIM: NA; Uniprot ID:RPC8_HUMAN; ENSEMBL ID: ENSG00000100413; HGNC ID: 30349 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.712617
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 32 / 564012 | 56 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 2 / 23620 | 84 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 97 / 1939121 | 50 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 2 / 34366 | 58 | |
| chondrosarcoma | 6 / 82823 | 72 | |
| colorectal tumor | 6 / 114246 | 52 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 7 / 119369 | 58 | |
| germ cell tumor | 14 / 263845 | 53 | |
| glioma | 10 / 106883 | 93 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 7 / 71755 | 97 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 175 / 3360307 | 52 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 36 / 125680 | 286 |  |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 24 / 124949 | 192 | |
| soft tissue/muscle tissue tumor | 7 / 125191 | 55 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 6 / 71655 | 83 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 92 / 1100989 | 83 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 17 / 211054 | 80 | |
| heart | 4 / 89626 | 44 | |
| intestine | 13 / 234472 | 55 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 22 / 336974 | 65 | |
| lymph | 7 / 44270 | 158 | |
| lymph node | 2 / 91610 | 21 | |
| mammary gland | 6 / 153271 | 39 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 1 / 107715 | 9 |  |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 11 / 214812 | 51 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 15 / 280825 | 53 | |
| prostate | 7 / 189345 | 36 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 30 / 210574 | 142 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 1 / 96619 | 10 | |
| testis | 12 / 330442 | 36 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 6 / 13680 | 438 | |
| uterus | 15 / 232878 | 64 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_32_P201496
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.32 ± 0.45 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.26 ± 0.26 | |
| Basal Part of Pons | 6.41 ± 0.31 | |
| Cerebellar Cortex | 6.4 ± 0.26 | |
| Cerebellar Nuclei | 5.77 ± 0.35 | |
| Claustrum | 6.36 ± 0.61 | |
| Epithalamus | 6.58 ± 0.33 | |
| Frontal Lobe | 6.39 ± 0.41 | |
| Globus Pallidus | 5.89 ± 0.3 | |
| Hypothalamus | 6.13 ± 0.28 | |
| Insula | 6.27 ± 0.35 | |
| Limbic Lobe | 6.28 ± 0.38 | |
| Mesencephalon | 6.21 ± 0.42 | |
| Myelencephalon | 6.27 ± 0.43 | |
| Occipital Lobe | 6.02 ± 0.29 | |
| Parietal Lobe | 6.21 ± 0.36 | |
| Pontine Tegmentum | 6.18 ± 0.4 | |
| Striatum | 5.94 ± 0.33 | |
| Subthalamus | 5.99 ± 0.28 | |
| Temporal Lobe | 6.34 ± 0.35 | |
| Thalamus | 6.28 ± 0.35 | |
| White Matter | 5.8 ± 0.25 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Polr3h | CB | Cerebellum | 15.09 | |
| 37.76 | | |||
| Polr3h | CTX | Cerebral cortex | 91.93 | |
| 85.44 | | |||
| Polr3h | HIP | Hippocampal region | 40.3 | |
| 55.02 | | |||
| Polr3h | HPF | Hippocampal formation | 46.76 | |
| 55.12 | | |||
| Polr3h | HY | Hypothalamus | 18.47 | |
| 18.03 | | |||
| Polr3h | LSX | Lateral septal complex | 27.59 | |
| 23.89 | | |||
| Polr3h | MB | Midbrain | 10.93 | |
| 14.14 | | |||
| Polr3h | MY | Medulla | 9.86 | |
| 16.84 | | |||
| Polr3h | OLF | Olfactory bulb | 60.93 | |
| 56.63 | | |||
| Polr3h | P | Pons | 9.78 | |
| 14.87 | | |||
| Polr3h | PAL | Pallidum | 27.78 | |
| 27.54 | | |||
| Polr3h | RHP | Retrohippocampal region | 58.48 | |
| 56.37 | | |||
| Polr3h | sAMY | Striatum-like amygdalar nuclei | 27.24 | |
| 25.35 | | |||
| Polr3h | STR | Striatum | 34.26 | |
| 28.44 | | |||
| Polr3h | STRd | Striatum dorsal region | 29.77 | |
| 25.19 | | |||
| Polr3h | STRv | Striatum ventral region | 54.59 | |
| 40.48 | | |||
| Polr3h | TH | Thalamus | 33 | |
| 33.65 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00516066 | 28 | 123 | 150 | VVDESFVDTSPTGPSSADATTSSEELPK | Peptide Atlas |