AutismKB 2.0

Annotation Detail for AGA


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Basic Information Top
Gene Symbol:AGA ( AGU,ASRG,GA )
Gene Full Name: aspartylglucosaminidase
Band: 4q34.3
Quick LinksEntrez ID:175; OMIM: 613228; Uniprot ID:ASPG_HUMAN; ENSEMBL ID: ENSG00000038002; HGNC ID: 318
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus22 / 56401239
neonate1 / 3109732
infant1 / 2362042
juvenile1 / 5555617
adult63 / 193912132
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor1 / 1142468
esophageal tumor3 / 17290173
gastrointestinal tumor3 / 11936925
germ cell tumor1 / 2638453
glioma1 / 1068839
head and neck tumor3 / 13630222
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal126 / 336030737
ovarian tumor1 / 7668213
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS7 / 12568055
prostate cancer3 / 10268029
retinoblastoma0 / 463560 
skin tumor6 / 12494948
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue2 / 13106152
adrenal gland2 / 3319760
ascites2 / 4001549
bladder2 / 2975767
blood5 / 12347840
bone1 / 7165513
bone marrow0 / 488010 
brain29 / 110098926
cervix7 / 48171145
connective tissue6 / 14925540
ear2 / 16212123
embryonic tissue3 / 21572213
esophagus3 / 20209148
eye4 / 21105418
heart1 / 8962611
intestine6 / 23447225
kidney6 / 21177728
larynx0 / 241450 
liver1 / 2077434
lung11 / 33697432
lymph0 / 442700 
lymph node5 / 9161054
mammary gland9 / 15327158
mouth1 / 6705214
muscle2 / 10771518
nerve0 / 157680 
ovary1 / 1020519
pancreas8 / 21481237
parathyroid3 / 20539146
pharynx4 / 4132896
pituitary gland0 / 165850 
placenta7 / 28082524
prostate5 / 18934526
salivary gland1 / 2015549
skin7 / 21057433
spleen0 / 539520 
stomach3 / 9661931
testis12 / 33044236
thymus4 / 8113149
thyroid2 / 4747342
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus9 / 23287838
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 216064_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts23.9
Adipocyte4.95
AdrenalCortex5.35
Adrenalgland4.25
Amygdala5.1
Appendix5.15
AtrioventricularNode3.95
BDCA4+_DentriticCells19.4
Bonemarrow5.05
BronchialEpithelialCells4.95
CD105+_Endothelial5.05
CD14+_Monocytes7.9
CD19+_BCells(neg._sel.)11.4
CD33+_Myeloid16.15
CD34+8.45
CD4+_Tcells13.35
CD56+_NKCells14
CD71+_EarlyErythroid4.7
CD8+_Tcells15.95
CardiacMyocytes7.3
Caudatenucleus4.5
Cerebellum3.95
CerebellumPeduncles5.7
CiliaryGanglion3.85
CingulateCortex5.15
Colorectaladenocarcinoma5
DorsalRootGanglion4
FetalThyroid4.9
Fetalbrain4.85
Fetalliver7.5
Fetallung4.1
GlobusPallidus3.7
Heart6.5
Hypothalamus5.25
Kidney4.25
Leukemia_chronicMyelogenousK-5624.5
Leukemia_promyelocytic-HL-604.45
Leukemialymphoblastic(MOLT-4)4.05
Liver6.6
Lung5.35
Lymphnode4.45
Lymphoma_burkitts(Daudi)14.8
Lymphoma_burkitts(Raji)7.05
MedullaOblongata4.5
OccipitalLobe4.4
OlfactoryBulb3.95
Ovary3.45
Pancreas4
PancreaticIslet5.35
ParietalLobe5.3
Pituitary5.85
Placenta5.25
Pons4.8
PrefrontalCortex5.95
Prostate5.65
Salivarygland5.4
SkeletalMuscle6.05
Skin3.9
SmoothMuscle11.4
Spinalcord5.35
SubthalamicNucleus4.6
SuperiorCervicalGanglion5.85
TemporalLobe4.65
Testis4.3
TestisGermCell4.25
TestisIntersitial4.2
TestisLeydigCell5.4
TestisSeminiferousTubule5.15
Thalamus5.1
Thymus3.85
Thyroid6.35
Tongue4.9
Tonsil4.9
Trachea4.25
TrigeminalGanglion5.2
Uterus4.05
UterusCorpus4.5
WholeBlood5.55
Wholebrain3.95
colon5
pineal_day6.12
pineal_night6.2
retina9.6
small_intestine4.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P7099
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.64 ± 0.46
Basal Forebrain5.87 ± 0.34
Basal Part of Pons5.74 ± 0.34
Cerebellar Cortex5.49 ± 0.18
Cerebellar Nuclei6.07 ± 0.35
Claustrum5.83 ± 0.48
Epithalamus6.67 ± 0.32
Frontal Lobe5.93 ± 0.45
Globus Pallidus6.79 ± 0.32
Hypothalamus5.96 ± 0.54
Insula5.68 ± 0.29
Limbic Lobe5.71 ± 0.42
Mesencephalon5.89 ± 0.51
Myelencephalon5.88 ± 0.46
Occipital Lobe5.52 ± 0.35
Parietal Lobe5.65 ± 0.32
Pontine Tegmentum5.89 ± 0.35
Striatum6.27 ± 0.29
Subthalamus5.87 ± 0.44
Temporal Lobe5.72 ± 0.39
Thalamus5.93 ± 0.4
White Matter7.61 ± 0.24
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
ASPG_HUMAN_265 12 265 276 FLPSYQAVEYMR PRIDE
ASPG_HUMAN_266 12 266 277 FLPSYQAVEYMR PRIDE
ASPG_HUMAN_278 11 278 288 RGEDPTIACQK PRIDE
PAp00137283 31 235 265 VGDSPIPGAGAYADDTAGAAAATGNGDILMR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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