Annotation Detail for DNAH5
Basic Information Top
| Gene Symbol: | DNAH5 ( CILD3,DNAHC5,FLJ46759,HL1,KIAA1603,KTGNR,PCD ) |
|---|---|
| Gene Full Name: | dynein, axonemal, heavy chain 5 |
| Band: | 5p15.2 |
| Quick Links | Entrez ID:1767; OMIM: 603335; Uniprot ID:DYH5_HUMAN; ENSEMBL ID: ENSG00000039139; HGNC ID: 2950 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.212360
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 0 / 564012 | 0 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 29 / 1939121 | 14 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 31 / 3360307 | 9 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 13 / 125191 | 103 |  |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 5 / 1100989 | 4 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 13 / 149255 | 87 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 8 / 336974 | 23 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 8 / 214812 | 37 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_24_P388786
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.13 ± 1 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.47 ± 0.69 | |
| Basal Part of Pons | 2.67 ± 0.75 | |
| Cerebellar Cortex | 2.75 ± 0.7 | |
| Cerebellar Nuclei | 3.06 ± 0.85 | |
| Claustrum | 2.98 ± 0.86 | |
| Epithalamus | 6.18 ± 1.85 | |
| Frontal Lobe | 3.72 ± 0.85 | |
| Globus Pallidus | 2.72 ± 0.84 | |
| Hypothalamus | 3.62 ± 0.61 | |
| Insula | 4.27 ± 0.68 | |
| Limbic Lobe | 3.54 ± 0.85 | |
| Mesencephalon | 3.63 ± 1.04 | |
| Myelencephalon | 3.4 ± 1.08 | |
| Occipital Lobe | 2.25 ± 0.87 | |
| Parietal Lobe | 3.13 ± 0.79 | |
| Pontine Tegmentum | 3.4 ± 0.73 | |
| Striatum | 3.03 ± 1.93 | |
| Subthalamus | 2.96 ± 0.69 | |
| Temporal Lobe | 3.72 ± 0.8 | |
| Thalamus | 3.61 ± 0.73 | |
| White Matter | 1.58 ± 0.7 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Dnahc5 | CB | Cerebellum | 1.25 | |
| 2.24 | | |||
| Dnahc5 | CTX | Cerebral cortex | 2.14 | |
| 1.6 | | |||
| Dnahc5 | HIP | Hippocampal region | 2.98 | |
| 3.08 | | |||
| Dnahc5 | HPF | Hippocampal formation | 5.24 | |
| 4.59 | | |||
| Dnahc5 | HY | Hypothalamus | 2.29 | |
| 2.92 | | |||
| Dnahc5 | LSX | Lateral septal complex | 1.37 | |
| 1.43 | | |||
| Dnahc5 | MB | Midbrain | 1.78 | |
| 2.49 | | |||
| Dnahc5 | MY | Medulla | 0.36 | |
| 0.48 | | |||
| Dnahc5 | OLF | Olfactory bulb | 1.32 | |
| 0.99 | | |||
| Dnahc5 | P | Pons | 0.52 | |
| 0.7 | | |||
| Dnahc5 | PAL | Pallidum | 0.46 | |
| 0.52 | | |||
| Dnahc5 | RHP | Retrohippocampal region | 9.72 | |
| 7.22 | | |||
| Dnahc5 | sAMY | Striatum-like amygdalar nuclei | 0.76 | |
| 0.78 | | |||
| Dnahc5 | STR | Striatum | 0.34 | |
| 0.34 | | |||
| Dnahc5 | STRd | Striatum dorsal region | 0.18 | |
| 0.19 | | |||
| Dnahc5 | STRv | Striatum ventral region | 0.15 | |
| 0.11 | | |||
| Dnahc5 | TH | Thalamus | 0.54 | |
| 0.65 | |