Annotation Detail for SLC26A2
Basic Information Top
| Gene Symbol: | SLC26A2 ( D5S1708,DTD,DTDST,EDM4,MST153,MSTP157 ) |
|---|---|
| Gene Full Name: | solute carrier family 26 (sulfate transporter), member 2 |
| Band: | 5q32 |
| Quick Links | Entrez ID:1836; OMIM: 606718; Uniprot ID:S26A2_HUMAN; ENSEMBL ID: ENSG00000155850; HGNC ID: 10994 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.302738
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 28 / 564012 | 49 | |
| neonate | 2 / 31097 | 64 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 134 / 1939121 | 69 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 7 / 94178 | 74 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 9 / 136302 | 66 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 |  |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 12 / 97250 | 123 | |
| normal | 153 / 3360307 | 45 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 6 / 102680 | 58 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 5 / 124949 | 40 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 14 / 90257 | 155 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 2 / 29757 | 67 | |
| blood | 2 / 123478 | 16 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 32 / 1100989 | 29 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 13 / 211054 | 61 | |
| heart | 2 / 89626 | 22 | |
| intestine | 22 / 234472 | 93 | |
| kidney | 8 / 211777 | 37 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 14 / 336974 | 41 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 13 / 153271 | 84 | |
| mouth | 4 / 67052 | 59 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 3 / 214812 | 13 | |
| parathyroid | 4 / 20539 | 194 | |
| pharynx | 5 / 41328 | 120 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 34 / 280825 | 121 | |
| prostate | 14 / 189345 | 73 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 11 / 210574 | 52 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 4 / 96619 | 41 | |
| testis | 2 / 330442 | 6 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 4 / 47473 | 84 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 18 / 52413 | 343 |  |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 14 / 232878 | 60 | |
| vascular | 3 / 51780 | 57 | |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 205097_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 7.3 | |
| Adipocyte | 5.65 | |
| AdrenalCortex | 190.55 | |
| Adrenalgland | 395.7 | |
| Amygdala | 5.65 | |
| Appendix | 7.05 | |
| AtrioventricularNode | 16.4 | |
| BDCA4+_DentriticCells | 10 | |
| Bonemarrow | 6.45 | |
| BronchialEpithelialCells | 5.7 | |
| CD105+_Endothelial | 6.05 | |
| CD14+_Monocytes | 7.55 | |
| CD19+_BCells(neg._sel.) | 7.4 | |
| CD33+_Myeloid | 14.75 | |
| CD34+ | 71.05 | |
| CD4+_Tcells | 9.15 | |
| CD56+_NKCells | 10.05 | |
| CD71+_EarlyErythroid | 5.6 | |
| CD8+_Tcells | 10.75 | |
| CardiacMyocytes | 11.65 | |
| Caudatenucleus | 5.1 | |
| Cerebellum | 4.7 | |
| CerebellumPeduncles | 7.05 | |
| CiliaryGanglion | 17.55 | |
| CingulateCortex | 5.95 | |
| Colorectaladenocarcinoma | 5.7 | |
| DorsalRootGanglion | 37.65 | |
| FetalThyroid | 5.8 | |
| Fetalbrain | 5.5 | |
| Fetalliver | 5.05 | |
| Fetallung | 5.1 | |
| GlobusPallidus | 4.35 | |
| Heart | 7.45 | |
| Hypothalamus | 5.9 | |
| Kidney | 4.65 | |
| Leukemia_chronicMyelogenousK-562 | 5.1 | |
| Leukemia_promyelocytic-HL-60 | 5.15 | |
| Leukemialymphoblastic(MOLT-4) | 4.6 | |
| Liver | 7.75 | |
| Lung | 10.1 | |
| Lymphnode | 4.85 | |
| Lymphoma_burkitts(Daudi) | 7.3 | |
| Lymphoma_burkitts(Raji) | 8.2 | |
| MedullaOblongata | 5.2 | |
| OccipitalLobe | 4.95 | |
| OlfactoryBulb | 13.5 | |
| Ovary | 4.15 | |
| Pancreas | 4.9 | |
| PancreaticIslet | 7.65 | |
| ParietalLobe | 6.4 | |
| Pituitary | 209.7 | |
| Placenta | 144.7 | |
| Pons | 5.7 | |
| PrefrontalCortex | 7.1 | |
| Prostate | 104 | |
| Salivarygland | 4.85 | |
| SkeletalMuscle | 6.8 | |
| Skin | 9.2 | |
| SmoothMuscle | 7.05 | |
| Spinalcord | 6 | |
| SubthalamicNucleus | 5.45 | |
| SuperiorCervicalGanglion | 161.6 | |
| TemporalLobe | 5.5 | |
| Testis | 5 | |
| TestisGermCell | 4.7 | |
| TestisIntersitial | 4.9 | |
| TestisLeydigCell | 6 | |
| TestisSeminiferousTubule | 4.9 | |
| Thalamus | 5.85 | |
| Thymus | 9.9 | |
| Thyroid | 6.9 | |
| Tongue | 6.55 | |
| Tonsil | 5.85 | |
| Trachea | 85.2 | |
| TrigeminalGanglion | 9.1 | |
| Uterus | 15.35 | |
| UterusCorpus | 5.3 | |
| WholeBlood | 6.05 | |
| Wholebrain | 4.6 | |
| colon | 2311.45 |  |
| pineal_day | 7.44 | |
| pineal_night | 9.74 | |
| retina | 8.15 | |
| small_intestine | 36.25 | |
- Probe name: A_23_P250951
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.06 ± 0.53 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.56 ± 0.32 | |
| Basal Part of Pons | 4.95 ± 0.57 | |
| Cerebellar Cortex | 5.86 ± 0.31 | |
| Cerebellar Nuclei | 5.49 ± 0.56 | |
| Claustrum | 5.56 ± 0.64 | |
| Epithalamus | 6.08 ± 0.41 | |
| Frontal Lobe | 5.07 ± 0.56 | |
| Globus Pallidus | 5.51 ± 0.68 | |
| Hypothalamus | 5.67 ± 0.49 | |
| Insula | 5.08 ± 0.31 | |
| Limbic Lobe | 5.18 ± 0.61 | |
| Mesencephalon | 5.33 ± 0.56 | |
| Myelencephalon | 5.33 ± 0.5 | |
| Occipital Lobe | 5.31 ± 0.49 | |
| Parietal Lobe | 5.07 ± 0.54 | |
| Pontine Tegmentum | 5.28 ± 0.54 | |
| Striatum | 5.29 ± 0.62 | |
| Subthalamus | 5.39 ± 0.09 | |
| Temporal Lobe | 5.15 ± 0.59 | |
| Thalamus | 5.24 ± 0.34 | |
| White Matter | 6.27 ± 0.5 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Slc26a2 | CB | Cerebellum | 3.95 | |
| 5.43 | | |||
| Slc26a2 | CTX | Cerebral cortex | 13.03 | |
| 9.65 | | |||
| Slc26a2 | HIP | Hippocampal region | 16.22 | |
| 14.35 | | |||
| Slc26a2 | HPF | Hippocampal formation | 20.12 | |
| 17.15 | | |||
| Slc26a2 | HY | Hypothalamus | 6.31 | |
| 4.59 | | |||
| Slc26a2 | LSX | Lateral septal complex | 2.36 | |
| 1.61 | | |||
| Slc26a2 | MB | Midbrain | 3.86 | |
| 5.49 | | |||
| Slc26a2 | MY | Medulla | 3.51 | |
| 4.9 | | |||
| Slc26a2 | OLF | Olfactory bulb | 16.34 | |
| 13.48 | | |||
| Slc26a2 | P | Pons | 7.05 | |
| 12.45 | | |||
| Slc26a2 | PAL | Pallidum | 4.59 | |
| 3.71 | | |||
| Slc26a2 | RHP | Retrohippocampal region | 30.34 | |
| 23.99 | | |||
| Slc26a2 | sAMY | Striatum-like amygdalar nuclei | 12.26 | |
| 11.33 | | |||
| Slc26a2 | STR | Striatum | 8.69 | |
| 6.23 | | |||
| Slc26a2 | STRd | Striatum dorsal region | 9.44 | |
| 6.69 | | |||
| Slc26a2 | STRv | Striatum ventral region | 7.67 | |
| 4.89 | | |||
| Slc26a2 | TH | Thalamus | 7.63 | |
| 5.71 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00535171 | 9 | 271 | 279 | YLLGLNLPR | Peptide Atlas |