AutismKB 2.0

Annotation Detail for KRT24


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Basic Information Top
Gene Symbol:KRT24 ( FLJ20261,K24,KA24,MGC138169,MGC138173 )
Gene Full Name: keratin 24
Band: 17q21.2
Quick LinksEntrez ID:192666; OMIM: 607742; Uniprot ID:K1C24_HUMAN; ENSEMBL ID: ENSG00000167916; HGNC ID: 18527
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus4 / 5640127
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult26 / 193912113
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor5 / 13630236
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia6 / 9725061
normal22 / 33603076
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain0 / 11009890 
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye8 / 21105437
heart0 / 896260 
intestine1 / 2344724
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth1 / 6705214
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx4 / 4132896
pituitary gland0 / 165850 
placenta10 / 28082535
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus4 / 23287817
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 220267_at
Cell line Expression level Expression bar
721_B_lymphoblasts11.9
Adipocyte10.6
AdrenalCortex11.75
Adrenalgland9.05
Amygdala11
Appendix12.55
AtrioventricularNode15.05
BDCA4+_DentriticCells11
Bonemarrow10.8
BronchialEpithelialCells13.4
CD105+_Endothelial10.7
CD14+_Monocytes12.2
CD19+_BCells(neg._sel.)10.8
CD33+_Myeloid12.9
CD34+13.25
CD4+_Tcells11.7
CD56+_NKCells12.2
CD71+_EarlyErythroid10
CD8+_Tcells10.3
CardiacMyocytes28.15
Caudatenucleus9.55
Cerebellum8.25
CerebellumPeduncles12.35
CiliaryGanglion11.2
CingulateCortex14.4
Colorectaladenocarcinoma10.4
DorsalRootGanglion11
FetalThyroid10.35
Fetalbrain10.45
Fetalliver9.25
Fetallung8.45
GlobusPallidus9.15
Heart14.5
Hypothalamus10.75
Kidney9.05
Leukemia_chronicMyelogenousK-5629.4
Leukemia_promyelocytic-HL-609.05
Leukemialymphoblastic(MOLT-4)8.4
Liver14.35
Lung11
Lymphnode8.6
Lymphoma_burkitts(Daudi)13.65
Lymphoma_burkitts(Raji)16.05
MedullaOblongata9.5
OccipitalLobe9.45
OlfactoryBulb8.45
Ovary7.5
Pancreas8.6
PancreaticIslet11.3
ParietalLobe13.25
Pituitary12.5
Placenta65.95
Pons10.2
PrefrontalCortex12.05
Prostate11.8
Salivarygland8.65
SkeletalMuscle15.8
Skin9.95
SmoothMuscle12.15
Spinalcord11.15
SubthalamicNucleus9.7
SuperiorCervicalGanglion13.3
TemporalLobe10.25
Testis8.95
TestisGermCell8.95
TestisIntersitial8.9
TestisLeydigCell11.05
TestisSeminiferousTubule9.4
Thalamus10.85
Thymus7.8
Thyroid12.8
Tongue13.35
Tonsil37.05
Trachea8.9
TrigeminalGanglion13.65
Uterus8.15
UterusCorpus11.35
WholeBlood10
Wholebrain8.25
colon10.45
pineal_day14.3
pineal_night20.92
retina12.85
small_intestine10.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5926_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.21 ± 1.01
Basal Forebrain1.86 ± 0.44
Basal Part of Pons1.51 ± 0.61
Cerebellar Cortex2.25 ± 0.71
Cerebellar Nuclei2.74 ± 0.97
Claustrum2.67 ± 0.93
Epithalamus1.43 ± 0.69
Frontal Lobe1.64 ± 0.59
Globus Pallidus2.16 ± 0.55
Hypothalamus1.75 ± 0.62
Insula1.7 ± 0.58
Limbic Lobe1.9 ± 0.84
Mesencephalon2.04 ± 0.75
Myelencephalon1.84 ± 0.64
Occipital Lobe1.91 ± 0.71
Parietal Lobe1.86 ± 0.83
Pontine Tegmentum2.03 ± 0.78
Striatum1.75 ± 0.64
Subthalamus1.92 ± 0.62
Temporal Lobe1.72 ± 0.68
Thalamus1.8 ± 0.58
White Matter2.19 ± 0.28
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Krt24CBCerebellum7.59
8.54
Krt24CTXCerebral cortex12.78
9.15
Krt24HIPHippocampal region3.28
2.99
Krt24HPFHippocampal formation4.76
4.07
Krt24HYHypothalamus1.52
1.87
Krt24LSXLateral septal complex0.11
0
Krt24MBMidbrain0.97
1.52
Krt24MYMedulla1.63
1.87
Krt24OLFOlfactory bulb16.51
12.84
Krt24PPons0.51
0.85
Krt24PALPallidum3.68
3.39
Krt24RHPRetrohippocampal region8.89
6.8
Krt24sAMYStriatum-like amygdalar nuclei6.34
4.29
Krt24STRStriatum5.75
4.16
Krt24STRdStriatum dorsal region4.92
3.62
Krt24STRvStriatum ventral region9.23
6.14
Krt24THThalamus2.07
2.39
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00035509 7 225 231 LAADDFR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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