AutismKB 2.0

Annotation Detail for FAM86A


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Basic Information Top
Gene Symbol:FAM86A ( MGC19636 )
Gene Full Name: family with sequence similarity 86, member A
Band: 16p13.3
Quick LinksEntrez ID:196483; OMIM: NA; Uniprot ID:FA86A_HUMAN; ENSEMBL ID: ENSG00000118894; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst3 / 6231948
fetus5 / 5640128
neonate0 / 310970 
infant0 / 236200 
juvenile3 / 5555653
adult22 / 193912111
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor2 / 3436658
chondrosarcoma1 / 8282312
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor2 / 2638457
glioma3 / 10688328
head and neck tumor2 / 13630214
kidney tumor0 / 689590 
leukemia3 / 9584231
liver tumor1 / 9635910
lung tumor5 / 10312748
lymphoma3 / 7175541
non-neoplasia1 / 9725010
normal31 / 33603079
ovarian tumor2 / 7668226
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS8 / 12568063
prostate cancer1 / 1026809
retinoblastoma1 / 4635621
skin tumor4 / 12494932
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood4 / 12347832
bone3 / 7165541
bone marrow0 / 488010 
brain8 / 11009897
cervix2 / 4817141
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus0 / 202090 
eye3 / 21105414
heart1 / 8962611
intestine2 / 2344728
kidney0 / 2117770 
larynx0 / 241450 
liver2 / 2077439
lung17 / 33697450
lymph1 / 4427022
lymph node1 / 9161010
mammary gland3 / 15327119
mouth1 / 6705214
muscle0 / 1077150 
nerve1 / 1576863
ovary2 / 10205119
pancreas3 / 21481213
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta4 / 28082514
prostate2 / 18934510
salivary gland1 / 2015549
skin5 / 21057423
spleen0 / 539520 
stomach1 / 9661910
testis3 / 3304429
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 222013_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts4.9
Adipocyte4
AdrenalCortex4
Adrenalgland4.6
Amygdala4.1
Appendix4.05
AtrioventricularNode2.8
BDCA4+_DentriticCells4.25
Bonemarrow3.75
BronchialEpithelialCells3.8
CD105+_Endothelial3.85
CD14+_Monocytes4.05
CD19+_BCells(neg._sel.)4.1
CD33+_Myeloid4.85
CD34+4.95
CD4+_Tcells4.15
CD56+_NKCells4.55
CD71+_EarlyErythroid3.5
CD8+_Tcells3.8
CardiacMyocytes4.75
Caudatenucleus3.85
Cerebellum3.15
CerebellumPeduncles4.35
CiliaryGanglion2.65
CingulateCortex3.95
Colorectaladenocarcinoma3.9
DorsalRootGanglion2.95
FetalThyroid3.75
Fetalbrain3.7
Fetalliver3.35
Fetallung3.1
GlobusPallidus2.8
Heart4.8
Hypothalamus4.3
Kidney3.6
Leukemia_chronicMyelogenousK-5623.5
Leukemia_promyelocytic-HL-605
Leukemialymphoblastic(MOLT-4)3.1
Liver7.2
Lung4.3
Lymphnode3.35
Lymphoma_burkitts(Daudi)5.75
Lymphoma_burkitts(Raji)5.5
MedullaOblongata3.55
OccipitalLobe3.45
OlfactoryBulb3
Ovary2.55
Pancreas3.1
PancreaticIslet4.95
ParietalLobe4.05
Pituitary10.2
Placenta4
Pons3.7
PrefrontalCortex4.85
Prostate4.55
Salivarygland3.1
SkeletalMuscle4.55
Skin2.85
SmoothMuscle4.4
Spinalcord4.5
SubthalamicNucleus3.5
SuperiorCervicalGanglion4.25
TemporalLobe3.5
Testis3.35
TestisGermCell3.3
TestisIntersitial3.25
TestisLeydigCell3.8
TestisSeminiferousTubule3.3
Thalamus4.05
Thymus3.1
Thyroid5.3
Tongue4.1
Tonsil3.8
Trachea3.2
TrigeminalGanglion3.75
Uterus3.15
UterusCorpus3.5
WholeBlood4.25
Wholebrain3.75
colon4
pineal_day4.78
pineal_night4.72
retina4.75
small_intestine3.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P15233
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.44 ± 0.29
Basal Forebrain4.08 ± 0.37
Basal Part of Pons4.81 ± 0.35
Cerebellar Cortex3.9 ± 0.32
Cerebellar Nuclei4.29 ± 0.51
Claustrum3.9 ± 0.64
Epithalamus4.8 ± 0.56
Frontal Lobe4.35 ± 0.47
Globus Pallidus4.55 ± 0.33
Hypothalamus4.31 ± 0.59
Insula4.16 ± 0.46
Limbic Lobe4.4 ± 0.47
Mesencephalon4.16 ± 0.47
Myelencephalon4.31 ± 0.55
Occipital Lobe4.39 ± 0.55
Parietal Lobe4.33 ± 0.42
Pontine Tegmentum4.27 ± 0.51
Striatum5.16 ± 0.42
Subthalamus4.44 ± 0.21
Temporal Lobe4.16 ± 0.43
Thalamus4.64 ± 0.51
White Matter3.93 ± 0.34
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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