AutismKB 2.0

Annotation Detail for AHSG


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Basic Information Top
Gene Symbol:AHSG ( A2HS,AHS,FETUA,HSGA )
Gene Full Name: alpha-2-HS-glycoprotein
Band: 3q27.3
Quick LinksEntrez ID:197; OMIM: 138680; Uniprot ID:FETUA_HUMAN; ENSEMBL ID: ENSG00000145192; HGNC ID: 349
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus253 / 564012448
neonate0 / 310970 
infant0 / 236200 
juvenile9 / 55556161
adult115 / 193912159
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor2 / 2638457
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia31 / 95842323
liver tumor135 / 963591401
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal377 / 3360307112
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood31 / 123478251
bone0 / 716550 
bone marrow0 / 488010 
brain5 / 11009894
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue7 / 21572232
esophagus0 / 202090 
eye0 / 2110540 
heart16 / 89626178
intestine1 / 2344724
kidney0 / 2117770 
larynx0 / 241450 
liver387 / 2077431862
lung4 / 33697411
lymph0 / 442700 
lymph node0 / 916100 
mammary gland12 / 15327178
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen2 / 5395237
stomach0 / 966190 
testis1 / 3304423
thymus2 / 8113124
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 210929_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.55
Adipocyte8.05
AdrenalCortex12.3
Adrenalgland8.5
Amygdala9
Appendix15.4
AtrioventricularNode18.3
BDCA4+_DentriticCells8.35
Bonemarrow11.9
BronchialEpithelialCells8.65
CD105+_Endothelial11.6
CD14+_Monocytes9.5
CD19+_BCells(neg._sel.)9.1
CD33+_Myeloid16.3
CD34+10.65
CD4+_Tcells9.1
CD56+_NKCells10.15
CD71+_EarlyErythroid9.45
CD8+_Tcells8.15
CardiacMyocytes21.8
Caudatenucleus8.3
Cerebellum7.5
CerebellumPeduncles11.6
CiliaryGanglion10.9
CingulateCortex9.75
Colorectaladenocarcinoma8.7
DorsalRootGanglion14.05
FetalThyroid32.65
Fetalbrain7.85
Fetalliver17743.4
Fetallung5792.25
GlobusPallidus7.95
Heart16.95
Hypothalamus9.1
Kidney8.8
Leukemia_chronicMyelogenousK-5628.15
Leukemia_promyelocytic-HL-607.6
Leukemialymphoblastic(MOLT-4)6.9
Liver26899.15
Lung9.95
Lymphnode7.25
Lymphoma_burkitts(Daudi)12.3
Lymphoma_burkitts(Raji)15.75
MedullaOblongata7.7
OccipitalLobe8.05
OlfactoryBulb7.05
Ovary7.05
Pancreas8.1
PancreaticIslet11.7
ParietalLobe10.4
Pituitary11.4
Placenta8.4
Pons9.4
PrefrontalCortex10.4
Prostate17.2
Salivarygland8.35
SkeletalMuscle20.2
Skin11.6
SmoothMuscle9.6
Spinalcord9.7
SubthalamicNucleus8.95
SuperiorCervicalGanglion24
TemporalLobe9.1
Testis7.85
TestisGermCell7.05
TestisIntersitial8.15
TestisLeydigCell10.3
TestisSeminiferousTubule7.85
Thalamus9.85
Thymus6.6
Thyroid10.75
Tongue13.65
Tonsil9.95
Trachea7.15
TrigeminalGanglion17.85
Uterus7.15
UterusCorpus10.55
WholeBlood9.75
Wholebrain6.85
colon9.05
pineal_day11.84
pineal_night11.28
retina11.25
small_intestine8.4
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P155509
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.7 ± 0.62
Basal Forebrain3.67 ± 0.33
Basal Part of Pons3.39 ± 1.07
Cerebellar Cortex3.21 ± 0.54
Cerebellar Nuclei3.59 ± 0.43
Claustrum3.77 ± 0.54
Epithalamus2.81 ± 0.74
Frontal Lobe3.6 ± 0.58
Globus Pallidus2.85 ± 0.93
Hypothalamus3.08 ± 0.75
Insula3.76 ± 0.26
Limbic Lobe3.63 ± 0.59
Mesencephalon3.45 ± 0.62
Myelencephalon3.5 ± 0.57
Occipital Lobe3.52 ± 0.64
Parietal Lobe3.62 ± 0.61
Pontine Tegmentum3.57 ± 0.67
Striatum2.84 ± 0.83
Subthalamus3.26 ± 0.59
Temporal Lobe3.73 ± 0.64
Thalamus3.28 ± 0.69
White Matter2.8 ± 0.39
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
AhsgCBCerebellum1
1.57
AhsgCTXCerebral cortex0.89
0.98
AhsgHIPHippocampal region1.26
1.27
AhsgHPFHippocampal formation1.31
1.54
AhsgHYHypothalamus0.35
0.29
AhsgLSXLateral septal complex0.14
0.17
AhsgMBMidbrain0.36
0.67
AhsgMYMedulla1.54
2.72
AhsgOLFOlfactory bulb12.08
9.79
AhsgPPons1.25
2.43
AhsgPALPallidum0.42
0.4
AhsgRHPRetrohippocampal region1.3
2
AhsgsAMYStriatum-like amygdalar nuclei0.64
0.94
AhsgSTRStriatum0.68
0.86
AhsgSTRdStriatum dorsal region0.32
0.7
AhsgSTRvStriatum ventral region2.36
1.68
AhsgTHThalamus0.39
0.38
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00000018 14 107 120 EHAVEGDCDFQLLK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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