AutismKB 2.0

Annotation Detail for ELAVL3


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Basic Information Top
Gene Symbol:ELAVL3 ( DKFZp547J036,HUC,HUCL,MGC20653,PLE21 )
Gene Full Name: ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)
Band: 19p13.2
Quick LinksEntrez ID:1995; OMIM: 603458; Uniprot ID:ELAV3_HUMAN; ENSEMBL ID: ENSG00000196361; HGNC ID: 3314
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus11 / 56401219
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult21 / 193912110
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor7 / 26384526
glioma10 / 10688393
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor4 / 10312738
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal53 / 336030715
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS22 / 125680175
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood1 / 1234788
bone0 / 716550 
bone marrow0 / 488010 
brain50 / 110098945
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye15 / 21105471
heart0 / 896260 
intestine0 / 2344720 
kidney0 / 2117770 
larynx0 / 241450 
liver0 / 2077430 
lung8 / 33697423
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis1 / 3304423
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206338_at
Cell line Expression level Expression bar
721_B_lymphoblasts112.25
Adipocyte135
AdrenalCortex179.35
Adrenalgland133.1
Amygdala71.15
Appendix125.9
AtrioventricularNode300.3
BDCA4+_DentriticCells60.45
Bonemarrow153.85
BronchialEpithelialCells59.4
CD105+_Endothelial118.05
CD14+_Monocytes107.55
CD19+_BCells(neg._sel.)104.45
CD33+_Myeloid107.15
CD34+126.4
CD4+_Tcells135.25
CD56+_NKCells90.1
CD71+_EarlyErythroid136.65
CD8+_Tcells94.35
CardiacMyocytes163.85
Caudatenucleus190.55
Cerebellum119.5
CerebellumPeduncles293.4
CiliaryGanglion206.95
CingulateCortex242.55
Colorectaladenocarcinoma92.8
DorsalRootGanglion202.85
FetalThyroid129
Fetalbrain130.1
Fetalliver103
Fetallung64.4
GlobusPallidus239.85
Heart153
Hypothalamus137.4
Kidney151.8
Leukemia_chronicMyelogenousK-562128.15
Leukemia_promyelocytic-HL-60100.95
Leukemialymphoblastic(MOLT-4)110.55
Liver115.95
Lung54.6
Lymphnode104.3
Lymphoma_burkitts(Daudi)189
Lymphoma_burkitts(Raji)104.65
MedullaOblongata136.7
OccipitalLobe176.35
OlfactoryBulb115.05
Ovary116.2
Pancreas126.75
PancreaticIslet148.95
ParietalLobe214.5
Pituitary183.15
Placenta121.95
Pons214.85
PrefrontalCortex140.45
Prostate72.65
Salivarygland118.45
SkeletalMuscle137.8
Skin240.95
SmoothMuscle129.85
Spinalcord163.7
SubthalamicNucleus436.1
SuperiorCervicalGanglion170.65
TemporalLobe179.35
Testis93.6
TestisGermCell76.25
TestisIntersitial115.35
TestisLeydigCell162.65
TestisSeminiferousTubule153.95
Thalamus264.05
Thymus62.5
Thyroid102.7
Tongue186.75
Tonsil144.8
Trachea127.35
TrigeminalGanglion243.05
Uterus72.15
UterusCorpus83.7
WholeBlood28.65
Wholebrain51
colon62.15
pineal_day149.54
pineal_night158.44
retina139.4
small_intestine43.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P218492
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.86 ± 0.58
Basal Forebrain5.81 ± 0.37
Basal Part of Pons6.36 ± 0.43
Cerebellar Cortex6.55 ± 0.33
Cerebellar Nuclei5.98 ± 0.5
Claustrum5.93 ± 0.54
Epithalamus4.99 ± 0.45
Frontal Lobe6.22 ± 0.48
Globus Pallidus5.34 ± 0.27
Hypothalamus5.6 ± 0.49
Insula6.04 ± 0.32
Limbic Lobe6.22 ± 0.47
Mesencephalon5.78 ± 0.47
Myelencephalon5.94 ± 0.6
Occipital Lobe5.62 ± 0.49
Parietal Lobe6.03 ± 0.38
Pontine Tegmentum5.88 ± 0.57
Striatum5.09 ± 0.36
Subthalamus5.65 ± 0.6
Temporal Lobe6.16 ± 0.39
Thalamus5.86 ± 0.43
White Matter6.36 ± 0.75
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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