Annotation Detail for ZNF627
Basic Information Top
| Gene Symbol: | ZNF627 ( FLJ90365 ) |
|---|---|
| Gene Full Name: | zinc finger protein 627 |
| Band: | 19p13.2 |
| Quick Links | Entrez ID:199692; OMIM: 612248; Uniprot ID:ZN627_HUMAN; ENSEMBL ID: ENSG00000198551; HGNC ID: 30570 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.526665
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 68 / 564012 | 120 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 47 / 1939121 | 24 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 13 / 119369 | 108 | |
| germ cell tumor | 21 / 263845 | 79 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 |  |
| normal | 147 / 3360307 | 43 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 69 / 1100989 | 62 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 4 / 211054 | 18 | |
| heart | 4 / 89626 | 44 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 4 / 67052 | 59 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 6 / 210574 | 28 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 10 / 96619 | 103 | |
| testis | 33 / 330442 | 99 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 15 / 232878 | 64 | |
| vascular | 4 / 51780 | 77 | |
Microarray in - Probe name: A_23_P135730
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.57 ± 0.54 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.89 ± 0.26 | |
| Basal Part of Pons | 4.99 ± 0.26 | |
| Cerebellar Cortex | 5.18 ± 0.31 | |
| Cerebellar Nuclei | 4.68 ± 0.38 | |
| Claustrum | 4 ± 0.71 | |
| Epithalamus | 5.45 ± 0.67 | |
| Frontal Lobe | 4.88 ± 0.44 | |
| Globus Pallidus | 4.35 ± 0.44 | |
| Hypothalamus | 4.79 ± 0.73 | |
| Insula | 4.83 ± 0.38 | |
| Limbic Lobe | 4.55 ± 0.58 | |
| Mesencephalon | 4.69 ± 0.53 | |
| Myelencephalon | 4.7 ± 0.51 | |
| Occipital Lobe | 4.36 ± 0.56 | |
| Parietal Lobe | 4.74 ± 0.51 | |
| Pontine Tegmentum | 4.7 ± 0.54 | |
| Striatum | 4.43 ± 0.4 | |
| Subthalamus | 4.49 ± 0.35 | |
| Temporal Lobe | 4.79 ± 0.46 | |
| Thalamus | 4.72 ± 0.45 | |
| White Matter | 4.48 ± 0.33 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| BC050078 | CB | Cerebellum | 0.59 | |
| 0.81 | | |||
| BC050078 | CTX | Cerebral cortex | 0.53 | |
| 0.74 | | |||
| BC050078 | HIP | Hippocampal region | 0.36 | |
| 0.39 | | |||
| BC050078 | HPF | Hippocampal formation | 0.34 | |
| 0.41 | | |||
| BC050078 | HY | Hypothalamus | 0.18 | |
| 0.24 | | |||
| BC050078 | LSX | Lateral septal complex | 0.1 | |
| 0.78 | | |||
| BC050078 | MB | Midbrain | 0.33 | |
| 0.51 | | |||
| BC050078 | MY | Medulla | 0.35 | |
| 0.53 | | |||
| BC050078 | OLF | Olfactory bulb | 0.93 | |
| 0.92 | | |||
| BC050078 | P | Pons | 0.43 | |
| 0.63 | | |||
| BC050078 | PAL | Pallidum | 0.15 | |
| 0.27 | | |||
| BC050078 | RHP | Retrohippocampal region | 0.29 | |
| 0.44 | | |||
| BC050078 | sAMY | Striatum-like amygdalar nuclei | 0.09 | |
| 0.79 | | |||
| BC050078 | STR | Striatum | 0.09 | |
| 0.23 | | |||
| BC050078 | STRd | Striatum dorsal region | 0.08 | |
| 0.16 | | |||
| BC050078 | STRv | Striatum ventral region | 0.09 | |
| 0.06 | | |||
| BC050078 | TH | Thalamus | 0.11 | |
| 0.19 | |