Annotation Detail for TMEM201
Basic Information Top
| Gene Symbol: | TMEM201 ( NET5 ) |
|---|---|
| Gene Full Name: | transmembrane protein 201 |
| Band: | 1p36.22 |
| Quick Links | Entrez ID:199953; OMIM: NA; Uniprot ID:TM201_HUMAN; ENSEMBL ID: ENSG00000188807; HGNC ID: 33719 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.632365
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 15 / 564012 | 26 | |
| neonate | 0 / 31097 | 0 | |
| infant | 2 / 23620 | 84 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 19 / 1939121 | 9 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 2 / 71755 | 27 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 46 / 3360307 | 13 | |
| ovarian tumor | 5 / 76682 | 65 | |
| pancreatic tumor | 19 / 104616 | 181 | |
| primitive neuroectodermal tumor of the CNS | 14 / 125680 | 111 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 6 / 46356 | 129 | |
| skin tumor | 10 / 124949 | 80 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 20 / 1100989 | 18 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 7 / 211054 | 33 | |
| heart | 3 / 89626 | 33 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 2 / 336974 | 5 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 5 / 107715 | 46 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 21 / 214812 | 97 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 12 / 210574 | 56 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 2 / 330442 | 6 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_816_PI416573500
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.58 ± 0.81 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.24 ± 0.45 | |
| Basal Part of Pons | 3.22 ± 0.67 | |
| Cerebellar Cortex | 3.07 ± 0.65 | |
| Cerebellar Nuclei | 3.17 ± 0.53 | |
| Claustrum | 3.85 ± 0.68 | |
| Epithalamus | 2.67 ± 0.62 | |
| Frontal Lobe | 3.24 ± 0.67 | |
| Globus Pallidus | 3.77 ± 0.5 | |
| Hypothalamus | 3.06 ± 0.66 | |
| Insula | 3.07 ± 0.63 | |
| Limbic Lobe | 3.4 ± 0.63 | |
| Mesencephalon | 3.19 ± 0.77 | |
| Myelencephalon | 3.27 ± 0.73 | |
| Occipital Lobe | 3.44 ± 0.76 | |
| Parietal Lobe | 3.23 ± 0.63 | |
| Pontine Tegmentum | 3.19 ± 0.75 | |
| Striatum | 3.49 ± 0.75 | |
| Subthalamus | 2.35 ± 0.76 | |
| Temporal Lobe | 3.12 ± 0.73 | |
| Thalamus | 3.33 ± 0.67 | |
| White Matter | 2.27 ± 0.16 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| D4Ertd429e | CB | Cerebellum | 61.38 | |
| 76.53 | | |||
| D4Ertd429e | CTX | Cerebral cortex | 51.09 | |
| 38.43 | | |||
| D4Ertd429e | HIP | Hippocampal region | 38.69 | |
| 52.13 | | |||
| D4Ertd429e | HPF | Hippocampal formation | 40.92 | |
| 44.93 | | |||
| D4Ertd429e | HY | Hypothalamus | 31.32 | |
| 24.13 | | |||
| D4Ertd429e | LSX | Lateral septal complex | 48.04 | |
| 37.27 | | |||
| D4Ertd429e | MB | Midbrain | 28.28 | |
| 25.19 | | |||
| D4Ertd429e | MY | Medulla | 34.09 | |
| 34.1 | | |||
| D4Ertd429e | OLF | Olfactory bulb | 55.15 | |
| 46.21 | | |||
| D4Ertd429e | P | Pons | 36.06 | |
| 35.13 | | |||
| D4Ertd429e | PAL | Pallidum | 35.95 | |
| 30.9 | | |||
| D4Ertd429e | RHP | Retrohippocampal region | 43.46 | |
| 35.78 | | |||
| D4Ertd429e | sAMY | Striatum-like amygdalar nuclei | 40.84 | |
| 27.98 | | |||
| D4Ertd429e | STR | Striatum | 39.76 | |
| 29.35 | | |||
| D4Ertd429e | STRd | Striatum dorsal region | 31.63 | |
| 23 | | |||
| D4Ertd429e | STRv | Striatum ventral region | 65.36 | |
| 48.14 | | |||
| D4Ertd429e | TH | Thalamus | 35.26 | |
| 31.57 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00504122 | 9 | 146 | 154 | YDEEVEVYR | Peptide Atlas |