Annotation Detail for MUC20
Basic Information Top
| Gene Symbol: | MUC20 ( FLJ14408,FLJ53153,KIAA1359,MUC-20 ) |
|---|---|
| Gene Full Name: | mucin 20, cell surface associated |
| Band: | 3q29 |
| Quick Links | Entrez ID:200958; OMIM: 610360; Uniprot ID:MUC20_HUMAN; ENSEMBL ID: ENSG00000176945; HGNC ID: 23282 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.308992
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 10 / 564012 | 17 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 156 / 1939121 | 80 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 24 / 114246 | 210 |  |
| esophageal tumor | 5 / 17290 | 289 | |
| gastrointestinal tumor | 11 / 119369 | 92 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 17 / 136302 | 124 | |
| kidney tumor | 46 / 68959 | 667 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 2 / 96359 | 20 | |
| lung tumor | 5 / 103127 | 48 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 118 / 3360307 | 35 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
| uterine tumor | 11 / 90257 | 121 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 7 / 40015 | 174 | |
| bladder | 2 / 29757 | 67 | |
| blood | 0 / 123478 | 0 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 16 / 1100989 | 14 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 6 / 20209 | 296 | |
| eye | 10 / 211054 | 47 | |
| heart | 0 / 89626 | 0 | |
| intestine | 45 / 234472 | 191 | |
| kidney | 64 / 211777 | 302 | |
| larynx | 0 / 24145 | 0 | |
| liver | 8 / 207743 | 38 | |
| lung | 18 / 336974 | 53 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 18 / 67052 | 268 | |
| muscle | 2 / 107715 | 18 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 5 / 41328 | 120 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 15 / 280825 | 53 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 15 / 96619 | 155 | |
| testis | 1 / 330442 | 3 | |
| thymus | 8 / 81131 | 98 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 10 / 52413 | 190 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 13 / 232878 | 55 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P92222
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.17 ± 0.31 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.46 ± 0.22 | |
| Basal Part of Pons | 7.43 ± 0.25 | |
| Cerebellar Cortex | 7.62 ± 0.38 | |
| Cerebellar Nuclei | 7.67 ± 0.34 | |
| Claustrum | 7.26 ± 0.32 | |
| Epithalamus | 8.37 ± 0.67 | |
| Frontal Lobe | 7.26 ± 0.45 | |
| Globus Pallidus | 7.97 ± 0.4 | |
| Hypothalamus | 7.19 ± 0.34 | |
| Insula | 7.21 ± 0.25 | |
| Limbic Lobe | 7.24 ± 0.46 | |
| Mesencephalon | 7.46 ± 0.58 | |
| Myelencephalon | 7.45 ± 0.51 | |
| Occipital Lobe | 7.81 ± 0.52 | |
| Parietal Lobe | 7.35 ± 0.31 | |
| Pontine Tegmentum | 7.35 ± 0.33 | |
| Striatum | 7.95 ± 0.52 | |
| Subthalamus | 7.45 ± 0.26 | |
| Temporal Lobe | 7.29 ± 0.31 | |
| Thalamus | 7.52 ± 0.36 | |
| White Matter | 8.99 ± 0.18 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Muc20 | CB | Cerebellum | 1.89 | |
| 2.49 | | |||
| Muc20 | CTX | Cerebral cortex | 1.57 | |
| 1.31 | | |||
| Muc20 | HIP | Hippocampal region | 2.33 | |
| 2.31 | | |||
| Muc20 | HPF | Hippocampal formation | 2.12 | |
| 2.03 | | |||
| Muc20 | HY | Hypothalamus | 0.06 | |
| 0.05 | | |||
| Muc20 | LSX | Lateral septal complex | 0.04 | |
| 0 | | |||
| Muc20 | MB | Midbrain | 0.38 | |
| 0.66 | | |||
| Muc20 | MY | Medulla | 1.37 | |
| 2.01 | | |||
| Muc20 | OLF | Olfactory bulb | 3.14 | |
| 2.55 | | |||
| Muc20 | P | Pons | 0.18 | |
| 0.23 | | |||
| Muc20 | PAL | Pallidum | 0.07 | |
| 0.05 | | |||
| Muc20 | RHP | Retrohippocampal region | 1.87 | |
| 1.71 | | |||
| Muc20 | sAMY | Striatum-like amygdalar nuclei | 0.34 | |
| 0.37 | | |||
| Muc20 | STR | Striatum | 1.09 | |
| 0.84 | | |||
| Muc20 | STRd | Striatum dorsal region | 1.62 | |
| 1.24 | | |||
| Muc20 | STRv | Striatum ventral region | 0.07 | |
| 0.09 | | |||
| Muc20 | TH | Thalamus | 0.38 | |
| 0.53 | |