Annotation Detail for SAMD14
Basic Information Top
| Gene Symbol: | SAMD14 ( FLJ36890 ) |
|---|---|
| Gene Full Name: | sterile alpha motif domain containing 14 |
| Band: | 17q21.33 |
| Quick Links | Entrez ID:201191; OMIM: NA; Uniprot ID:SAM14_HUMAN; ENSEMBL ID: ENSG00000167100; HGNC ID: 27312 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.567769
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 27 / 564012 | 47 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 13 / 1939121 | 6 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 87 / 3360307 | 25 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 5 / 125680 | 39 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 62 / 1100989 | 56 |  |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 6 / 215722 | 27 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 7 / 211054 | 33 | |
| heart | 0 / 89626 | 0 | |
| intestine | 1 / 234472 | 4 | |
| kidney | 3 / 211777 | 14 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 1 / 336974 | 2 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 4 / 330442 | 12 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: CUST_148_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.75 ± 0.98 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.32 ± 0.25 | |
| Basal Part of Pons | 2.04 ± 0.56 | |
| Cerebellar Cortex | 2.55 ± 0.82 | |
| Cerebellar Nuclei | 2.55 ± 0.71 | |
| Claustrum | 3.22 ± 0.9 | |
| Epithalamus | 1.93 ± 0.8 | |
| Frontal Lobe | 2.2 ± 0.71 | |
| Globus Pallidus | 2.68 ± 0.39 | |
| Hypothalamus | 2.32 ± 0.67 | |
| Insula | 2.39 ± 0.98 | |
| Limbic Lobe | 2.4 ± 0.73 | |
| Mesencephalon | 2.47 ± 0.75 | |
| Myelencephalon | 2.37 ± 0.76 | |
| Occipital Lobe | 2.46 ± 0.69 | |
| Parietal Lobe | 2.23 ± 0.78 | |
| Pontine Tegmentum | 2.34 ± 0.69 | |
| Striatum | 2.31 ± 0.65 | |
| Subthalamus | 2.57 ± 0.79 | |
| Temporal Lobe | 2.27 ± 0.72 | |
| Thalamus | 2.34 ± 0.64 | |
| White Matter | 2.59 ± 0.4 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Samd14 | CB | Cerebellum | 73.57 | |
| 79.01 | | |||
| Samd14 | CTX | Cerebral cortex | 14.05 | |
| 10.68 | | |||
| Samd14 | HIP | Hippocampal region | 26.12 | |
| 34.61 | | |||
| Samd14 | HPF | Hippocampal formation | 28.53 | |
| 30.98 | | |||
| Samd14 | HY | Hypothalamus | 35.13 | |
| 28.52 | | |||
| Samd14 | LSX | Lateral septal complex | 24.22 | |
| 20.81 | | |||
| Samd14 | MB | Midbrain | 40.84 | |
| 38.08 | | |||
| Samd14 | MY | Medulla | 18.91 | |
| 21.3 | | |||
| Samd14 | OLF | Olfactory bulb | 36.57 | |
| 31.63 | | |||
| Samd14 | P | Pons | 22.04 | |
| 21.65 | | |||
| Samd14 | PAL | Pallidum | 24.54 | |
| 21.43 | | |||
| Samd14 | RHP | Retrohippocampal region | 31.36 | |
| 26.34 | | |||
| Samd14 | sAMY | Striatum-like amygdalar nuclei | 40.2 | |
| 29.75 | | |||
| Samd14 | STR | Striatum | 13.99 | |
| 12.7 | | |||
| Samd14 | STRd | Striatum dorsal region | 5.75 | |
| 6.61 | | |||
| Samd14 | STRv | Striatum ventral region | 21.46 | |
| 17.76 | | |||
| Samd14 | TH | Thalamus | 21.1 | |
| 20.75 | |