AutismKB 2.0

Annotation Detail for EMP1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:EMP1 ( CL-20,EMP-1,TMP )
Gene Full Name: epithelial membrane protein 1
Band: 12p13.1
Quick LinksEntrez ID:2012; OMIM: 602333; Uniprot ID:EMP1_HUMAN; ENSEMBL ID: ENSG00000134531; HGNC ID: 3333
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst4 / 6231964
fetus39 / 56401269
neonate72 / 310972315
infant0 / 236200 
juvenile4 / 5555671
adult244 / 1939121125
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor8 / 9417884
cervical tumor4 / 34366116
chondrosarcoma27 / 82823325
colorectal tumor5 / 11424643
esophageal tumor73 / 172904222
gastrointestinal tumor9 / 11936975
germ cell tumor73 / 263845276
glioma17 / 106883159
head and neck tumor58 / 136302425
kidney tumor0 / 689590 
leukemia9 / 9584293
liver tumor6 / 9635962
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia43 / 97250442
normal650 / 3360307193
ovarian tumor3 / 7668239
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor9 / 12494972
soft tissue/muscle tissue tumor9 / 12519171
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue6 / 13106457
adrenal gland2 / 3319760
ascites2 / 4001549
bladder5 / 29757168
blood8 / 12347864
bone13 / 71655181
bone marrow1 / 4880120
brain104 / 110098994
cervix12 / 48171249
connective tissue81 / 149255542
ear0 / 162120 
embryonic tissue15 / 21572269
esophagus95 / 202094700
eye20 / 21105494
heart25 / 89626278
intestine31 / 234472132
kidney38 / 211777179
larynx1 / 2414541
liver15 / 20774372
lung51 / 336974151
lymph0 / 442700 
lymph node3 / 9161032
mammary gland22 / 153271143
mouth102 / 670521521
muscle36 / 107715334
nerve4 / 15768253
ovary4 / 10205139
pancreas6 / 21481227
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta29 / 280825103
prostate4 / 18934521
salivary gland0 / 201550 
skin101 / 210574479
spleen1 / 5395218
stomach13 / 96619134
testis26 / 33044278
thymus16 / 81131197
thyroid4 / 4747384
tonsil0 / 169990 
trachea27 / 52413515
umbilical cord6 / 13680438
uterus43 / 232878184
vascular171 / 517803302
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 201324_at
Cell line Expression level Expression bar
721_B_lymphoblasts10.05
Adipocyte407.85
AdrenalCortex37.15
Adrenalgland15.35
Amygdala11.8
Appendix21.3
AtrioventricularNode18.65
BDCA4+_DentriticCells9.4
Bonemarrow13.85
BronchialEpithelialCells54.25
CD105+_Endothelial10.65
CD14+_Monocytes12.15
CD19+_BCells(neg._sel.)10.6
CD33+_Myeloid70.9
CD34+34.8
CD4+_Tcells9.3
CD56+_NKCells10.6
CD71+_EarlyErythroid11.15
CD8+_Tcells8.7
CardiacMyocytes193.45
Caudatenucleus9.55
Cerebellum8.8
CerebellumPeduncles14.8
CiliaryGanglion224.65
CingulateCortex11.75
Colorectaladenocarcinoma227.05
DorsalRootGanglion15.5
FetalThyroid47.85
Fetalbrain10.2
Fetalliver9.7
Fetallung309.55
GlobusPallidus9.95
Heart24.5
Hypothalamus12.75
Kidney11.7
Leukemia_chronicMyelogenousK-5628.9
Leukemia_promyelocytic-HL-609.55
Leukemialymphoblastic(MOLT-4)7.45
Liver19.8
Lung102.05
Lymphnode13.75
Lymphoma_burkitts(Daudi)15.2
Lymphoma_burkitts(Raji)19.3
MedullaOblongata8.8
OccipitalLobe9.8
OlfactoryBulb73.25
Ovary10.95
Pancreas22.2
PancreaticIslet12.65
ParietalLobe13.85
Pituitary13.5
Placenta95.75
Pons23.1
PrefrontalCortex11.4
Prostate24.7
Salivarygland10.2
SkeletalMuscle21.55
Skin128.8
SmoothMuscle239.3
Spinalcord86.25
SubthalamicNucleus11.8
SuperiorCervicalGanglion41.3
TemporalLobe11.05
Testis9.1
TestisGermCell8.7
TestisIntersitial9.75
TestisLeydigCell12.45
TestisSeminiferousTubule9.5
Thalamus12.35
Thymus21.45
Thyroid669.8
Tongue1879.1
Tonsil513.75
Trachea89.5
TrigeminalGanglion28.8
Uterus171.55
UterusCorpus13.65
WholeBlood10.45
Wholebrain7.35
colon400.85
pineal_day24.7
pineal_night24.1
retina634.25
small_intestine476.25
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6625_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.76 ± 0.97
Basal Forebrain2.53 ± 0.5
Basal Part of Pons2.13 ± 0.6
Cerebellar Cortex2.07 ± 0.51
Cerebellar Nuclei2.61 ± 0.82
Claustrum3.02 ± 0.76
Epithalamus2.96 ± 0.76
Frontal Lobe2.24 ± 0.71
Globus Pallidus3.66 ± 0.74
Hypothalamus2.69 ± 0.86
Insula2.46 ± 0.79
Limbic Lobe2.33 ± 0.66
Mesencephalon2.7 ± 0.74
Myelencephalon2.39 ± 0.78
Occipital Lobe2.53 ± 1.01
Parietal Lobe2.49 ± 0.84
Pontine Tegmentum2.43 ± 0.73
Striatum2.88 ± 0.68
Subthalamus2.54 ± 0.79
Temporal Lobe2.25 ± 0.74
Thalamus2.29 ± 0.61
White Matter2.69 ± 0.25
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved