Annotation Detail for SLC39A11
Basic Information Top
| Gene Symbol: | SLC39A11 ( C17orf26,ZIP11 ) |
|---|---|
| Gene Full Name: | solute carrier family 39 (metal ion transporter), member 11 |
| Band: | 17q24.3-q25.1 |
| Quick Links | Entrez ID:201266; OMIM: NA; Uniprot ID:S39AB_HUMAN; ENSEMBL ID: ENSG00000133195; HGNC ID: 14463 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.221127
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 8 / 564012 | 14 | |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 71 / 1939121 | 36 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 |  |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 12 / 82823 | 144 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 1 / 106883 | 9 |  |
| head and neck tumor | 21 / 136302 | 154 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 8 / 95842 | 83 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 73 / 3360307 | 21 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 7 / 46356 | 151 | |
| skin tumor | 21 / 124949 | 168 | |
| soft tissue/muscle tissue tumor | 2 / 125191 | 15 | |
| uterine tumor | 6 / 90257 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 0 / 29757 | 0 | |
| blood | 13 / 123478 | 105 | |
| bone | 8 / 71655 | 111 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 12 / 1100989 | 10 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 7 / 149255 | 46 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 10 / 211054 | 47 | |
| heart | 3 / 89626 | 33 | |
| intestine | 8 / 234472 | 34 | |
| kidney | 11 / 211777 | 51 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 14 / 336974 | 41 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 7 / 153271 | 45 | |
| mouth | 13 / 67052 | 193 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 6 / 280825 | 21 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 7 / 20155 | 347 |  |
| skin | 25 / 210574 | 118 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 2 / 96619 | 20 | |
| testis | 2 / 330442 | 6 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 14 / 232878 | 60 | |
| vascular | 0 / 51780 | 0 |
- Probe name: A_23_P158969
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.54 ± 0.5 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.71 ± 0.52 | |
| Basal Part of Pons | 4.36 ± 0.54 | |
| Cerebellar Cortex | 4.33 ± 0.38 | |
| Cerebellar Nuclei | 4.75 ± 0.49 | |
| Claustrum | 4.63 ± 0.56 | |
| Epithalamus | 4.86 ± 0.61 | |
| Frontal Lobe | 4.72 ± 0.54 | |
| Globus Pallidus | 5.98 ± 0.48 | |
| Hypothalamus | 4.26 ± 0.65 | |
| Insula | 4.33 ± 0.54 | |
| Limbic Lobe | 4.51 ± 0.59 | |
| Mesencephalon | 4.75 ± 0.61 | |
| Myelencephalon | 4.72 ± 0.64 | |
| Occipital Lobe | 4.6 ± 0.62 | |
| Parietal Lobe | 4.71 ± 0.52 | |
| Pontine Tegmentum | 4.82 ± 0.61 | |
| Striatum | 4.64 ± 0.64 | |
| Subthalamus | 4.5 ± 0.33 | |
| Temporal Lobe | 4.62 ± 0.45 | |
| Thalamus | 5 ± 0.52 | |
| White Matter | 6.6 ± 0.27 | |
Mouse Brain ISH 