Annotation Detail for DNAJC18
Basic Information Top
| Gene Symbol: | DNAJC18 ( MGC29463 ) |
|---|---|
| Gene Full Name: | DnaJ (Hsp40) homolog, subfamily C, member 18 |
| Band: | 5q31.2 |
| Quick Links | Entrez ID:202052; OMIM: NA; Uniprot ID:DJC18_HUMAN; ENSEMBL ID: ENSG00000170464; HGNC ID: 28429 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.483537
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 6 / 62319 | 96 |  |
| fetus | 71 / 564012 | 125 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 44 / 1939121 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 15 / 263845 | 56 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 1 / 136302 | 7 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 204 / 3360307 | 60 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 136 / 1100989 | 123 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 11 / 211054 | 52 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 2 / 336974 | 5 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 49 / 330442 | 148 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 8 / 232878 | 34 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P123987
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.05 ± 0.43 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.8 ± 0.49 | |
| Basal Part of Pons | 5.42 ± 0.17 | |
| Cerebellar Cortex | 4.91 ± 0.28 | |
| Cerebellar Nuclei | 5.39 ± 0.35 | |
| Claustrum | 5.04 ± 0.42 | |
| Epithalamus | 4.78 ± 0.46 | |
| Frontal Lobe | 5.26 ± 0.31 | |
| Globus Pallidus | 5.41 ± 0.31 | |
| Hypothalamus | 5.03 ± 0.48 | |
| Insula | 5.23 ± 0.31 | |
| Limbic Lobe | 5.17 ± 0.36 | |
| Mesencephalon | 5.16 ± 0.32 | |
| Myelencephalon | 5.1 ± 0.39 | |
| Occipital Lobe | 5.03 ± 0.38 | |
| Parietal Lobe | 5.18 ± 0.33 | |
| Pontine Tegmentum | 5.14 ± 0.4 | |
| Striatum | 4.94 ± 0.38 | |
| Subthalamus | 5.36 ± 0.13 | |
| Temporal Lobe | 5.17 ± 0.36 | |
| Thalamus | 5.24 ± 0.3 | |
| White Matter | 5.34 ± 0.34 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Dnajc18 | CB | Cerebellum | 60.97 | |
| 96.78 | | |||
| Dnajc18 | CTX | Cerebral cortex | 100 | |
| 96.65 | | |||
| Dnajc18 | HIP | Hippocampal region | 98.95 | |
| 100 | | |||
| Dnajc18 | HPF | Hippocampal formation | 91.18 | |
| 100 | | |||
| Dnajc18 | HY | Hypothalamus | 77.92 | |
| 71.64 | | |||
| Dnajc18 | LSX | Lateral septal complex | 82.34 | |
| 62.68 | | |||
| Dnajc18 | MB | Midbrain | 88.73 | |
| 94.53 | | |||
| Dnajc18 | MY | Medulla | 95.65 | |
| 100 | | |||
| Dnajc18 | OLF | Olfactory bulb | 93.65 | |
| 91.53 | | |||
| Dnajc18 | P | Pons | 82.75 | |
| 100 | | |||
| Dnajc18 | PAL | Pallidum | 89.21 | |
| 94.05 | | |||
| Dnajc18 | RHP | Retrohippocampal region | 78.68 | |
| 75.22 | | |||
| Dnajc18 | sAMY | Striatum-like amygdalar nuclei | 86.25 | |
| 73.84 | | |||
| Dnajc18 | STR | Striatum | 90.86 | |
| 75.18 | | |||
| Dnajc18 | STRd | Striatum dorsal region | 89.18 | |
| 74.27 | | |||
| Dnajc18 | STRv | Striatum ventral region | 100 | |
| 84.82 | | |||
| Dnajc18 | TH | Thalamus | 83.58 | |
| 82.01 | |