AutismKB 2.0

Annotation Detail for RANBP3L


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Basic Information Top
Gene Symbol:RANBP3L ( FLJ25422 )
Gene Full Name: RAN binding protein 3-like
Band: 5p13.2
Quick LinksEntrez ID:202151; OMIM: NA; Uniprot ID:RNB3L_HUMAN; ENSEMBL ID: ENSG00000164188; HGNC ID: 26353
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P144929
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.1 ± 0.46
Basal Forebrain6.91 ± 0.28
Basal Part of Pons5.2 ± 0.8
Cerebellar Cortex5.21 ± 0.63
Cerebellar Nuclei4.38 ± 0.78
Claustrum6.08 ± 0.85
Epithalamus6.3 ± 0.38
Frontal Lobe6.25 ± 0.63
Globus Pallidus7.17 ± 0.28
Hypothalamus6.17 ± 0.43
Insula6.38 ± 0.61
Limbic Lobe6.32 ± 0.7
Mesencephalon6.51 ± 0.63
Myelencephalon6.33 ± 0.94
Occipital Lobe6.15 ± 0.67
Parietal Lobe6.36 ± 0.8
Pontine Tegmentum6.45 ± 0.67
Striatum7.55 ± 0.58
Subthalamus5.04 ± 0.83
Temporal Lobe6.24 ± 0.57
Thalamus6.53 ± 0.6
White Matter4.58 ± 0.98
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Ranbp3lCBCerebellum1.23
1.82
Ranbp3lCTXCerebral cortex4.63
3.24
Ranbp3lHIPHippocampal region4.82
4.5
Ranbp3lHPFHippocampal formation7.11
5.92
Ranbp3lHYHypothalamus0.17
0.23
Ranbp3lLSXLateral septal complex0.47
0.95
Ranbp3lMBMidbrain0.7
1.04
Ranbp3lMYMedulla0.59
0.84
Ranbp3lOLFOlfactory bulb4.99
4.82
Ranbp3lPPons0.8
1.12
Ranbp3lPALPallidum0.27
0.19
Ranbp3lRHPRetrohippocampal region10.66
7.71
Ranbp3lsAMYStriatum-like amygdalar nuclei0.67
0.5
Ranbp3lSTRStriatum1.65
1.16
Ranbp3lSTRdStriatum dorsal region2.47
1.69
Ranbp3lSTRvStriatum ventral region0.26
0.21
Ranbp3lTHThalamus0.36
0.37
Peptide Top

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Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018