Annotation Detail for ANKS6
Basic Information Top
| Gene Symbol: | ANKS6 ( ANKRD14,DKFZp686D24121,DKFZp781I0117,MGC70366,SAMD6 ) |
|---|---|
| Gene Full Name: | ankyrin repeat and sterile alpha motif domain containing 6 |
| Band: | 9q22.33 |
| Quick Links | Entrez ID:203286; OMIM: NA; Uniprot ID:ANKS6_HUMAN; ENSEMBL ID: ENSG00000165138; HGNC ID: 26724 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.406890
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 5 / 62319 | 80 |  |
| fetus | 12 / 564012 | 21 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 4 / 55556 | 71 | |
| adult | 64 / 1939121 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 3 / 94178 | 31 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 5 / 114246 | 43 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 9 / 119369 | 75 | |
| germ cell tumor | 2 / 263845 | 7 |  |
| glioma | 7 / 106883 | 65 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 4 / 103127 | 38 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 107 / 3360307 | 31 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 3 / 125680 | 23 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 3 / 125191 | 23 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 0 / 29757 | 0 | |
| blood | 3 / 123478 | 24 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 39 / 1100989 | 35 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 3 / 149255 | 20 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 13 / 215722 | 60 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 10 / 211054 | 47 | |
| heart | 3 / 89626 | 33 | |
| intestine | 9 / 234472 | 38 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 14 / 336974 | 41 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 12 / 153271 | 78 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 8 / 210574 | 37 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 4 / 96619 | 41 | |
| testis | 10 / 330442 | 30 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P380861
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 2.69 ± 1.08 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.15 ± 0.25 | |
| Basal Part of Pons | 3.06 ± 0.67 | |
| Cerebellar Cortex | 3.39 ± 0.47 | |
| Cerebellar Nuclei | 2.54 ± 0.63 | |
| Claustrum | 2.7 ± 0.75 | |
| Epithalamus | 2.63 ± 0.67 | |
| Frontal Lobe | 2.56 ± 0.8 | |
| Globus Pallidus | 2.27 ± 0.52 | |
| Hypothalamus | 2.48 ± 0.54 | |
| Insula | 2.7 ± 0.81 | |
| Limbic Lobe | 2.44 ± 0.82 | |
| Mesencephalon | 2.77 ± 0.79 | |
| Myelencephalon | 2.56 ± 0.8 | |
| Occipital Lobe | 2.77 ± 0.74 | |
| Parietal Lobe | 2.81 ± 0.68 | |
| Pontine Tegmentum | 2.52 ± 0.8 | |
| Striatum | 2.34 ± 0.88 | |
| Subthalamus | 2.43 ± 0.99 | |
| Temporal Lobe | 2.36 ± 0.77 | |
| Thalamus | 2.68 ± 0.65 | |
| White Matter | 3.89 ± 0.31 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Anks6 | CB | Cerebellum | 5.92 | |
| 7.29 | | |||
| Anks6 | CTX | Cerebral cortex | 3.76 | |
| 3.27 | | |||
| Anks6 | HIP | Hippocampal region | 6.41 | |
| 6.24 | | |||
| Anks6 | HPF | Hippocampal formation | 5.28 | |
| 4.86 | | |||
| Anks6 | HY | Hypothalamus | 3.3 | |
| 4.24 | | |||
| Anks6 | LSX | Lateral septal complex | 0.69 | |
| 0.48 | | |||
| Anks6 | MB | Midbrain | 1.44 | |
| 1.54 | | |||
| Anks6 | MY | Medulla | 5.09 | |
| 4.54 | | |||
| Anks6 | OLF | Olfactory bulb | 5.36 | |
| 4.42 | | |||
| Anks6 | P | Pons | 3.03 | |
| 2.98 | | |||
| Anks6 | PAL | Pallidum | 0.91 | |
| 1.06 | | |||
| Anks6 | RHP | Retrohippocampal region | 3.43 | |
| 2.94 | | |||
| Anks6 | sAMY | Striatum-like amygdalar nuclei | 0.6 | |
| 0.82 | | |||
| Anks6 | STR | Striatum | 1.23 | |
| 1.22 | | |||
| Anks6 | STRd | Striatum dorsal region | 1.17 | |
| 1.25 | | |||
| Anks6 | STRv | Striatum ventral region | 1.89 | |
| 1.53 | | |||
| Anks6 | TH | Thalamus | 1.36 | |
| 1.39 | |