Annotation Detail for C3orf58
Basic Information Top
| Gene Symbol: | C3orf58 ( DIA1,MGC33365 ) |
|---|---|
| Gene Full Name: | chromosome 3 open reading frame 58 |
| Band: | 3q24 |
| Quick Links | Entrez ID:205428; OMIM: 612200; Uniprot ID:CC058_HUMAN; ENSEMBL ID: ENSG00000181744; HGNC ID: 28490 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.288954
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 25 / 564012 | 44 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 62 / 1939121 | 31 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 16 / 136302 | 117 |  |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 110 / 3360307 | 32 | |
| ovarian tumor | 5 / 76682 | 65 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 4 / 48801 | 81 | |
| brain | 66 / 1100989 | 59 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 5 / 215722 | 23 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 8 / 211054 | 37 | |
| heart | 3 / 89626 | 33 | |
| intestine | 4 / 234472 | 17 | |
| kidney | 12 / 211777 | 56 | |
| larynx | 1 / 24145 | 41 | |
| liver | 4 / 207743 | 19 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 20 / 153271 | 130 | |
| mouth | 15 / 67052 | 223 |  |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 7 / 102051 | 68 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 12 / 280825 | 42 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 13 / 330442 | 39 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 3 / 232878 | 12 | |
| vascular | 7 / 51780 | 135 | |
Microarray in - Probe name: A_23_P144134
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.19 ± 0.79 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.98 ± 0.49 | |
| Basal Part of Pons | 6.41 ± 0.57 | |
| Cerebellar Cortex | 6.9 ± 0.18 | |
| Cerebellar Nuclei | 6.59 ± 0.45 | |
| Claustrum | 6.35 ± 1.01 | |
| Epithalamus | 7.13 ± 0.91 | |
| Frontal Lobe | 6.18 ± 0.51 | |
| Globus Pallidus | 6.43 ± 0.55 | |
| Hypothalamus | 6.67 ± 0.56 | |
| Insula | 6.12 ± 0.39 | |
| Limbic Lobe | 5.77 ± 0.6 | |
| Mesencephalon | 6.35 ± 0.64 | |
| Myelencephalon | 6.33 ± 0.61 | |
| Occipital Lobe | 7.06 ± 0.51 | |
| Parietal Lobe | 6.38 ± 0.51 | |
| Pontine Tegmentum | 6.36 ± 0.48 | |
| Striatum | 5.35 ± 0.57 | |
| Subthalamus | 6.81 ± 0.74 | |
| Temporal Lobe | 6.33 ± 0.51 | |
| Thalamus | 6.19 ± 0.56 | |
| White Matter | 8.09 ± 0.22 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 1190002N15Rik | CB | Cerebellum | 23.37 | |
| 62.27 | | |||
| 1190002N15Rik | CTX | Cerebral cortex | 5.17 | |
| 4.65 | | |||
| 1190002N15Rik | HIP | Hippocampal region | 2.04 | |
| 2.01 | | |||
| 1190002N15Rik | HPF | Hippocampal formation | 1.55 | |
| 1.47 | | |||
| 1190002N15Rik | HY | Hypothalamus | 0.15 | |
| 0.17 | | |||
| 1190002N15Rik | LSX | Lateral septal complex | 0.19 | |
| 0.11 | | |||
| 1190002N15Rik | MB | Midbrain | 1.23 | |
| 1.45 | | |||
| 1190002N15Rik | MY | Medulla | 3.42 | |
| 4.72 | | |||
| 1190002N15Rik | OLF | Olfactory bulb | 6.25 | |
| 4.78 | | |||
| 1190002N15Rik | P | Pons | 1.9 | |
| 2.76 | | |||
| 1190002N15Rik | PAL | Pallidum | 0.52 | |
| 1 | | |||
| 1190002N15Rik | RHP | Retrohippocampal region | 0.78 | |
| 0.76 | | |||
| 1190002N15Rik | sAMY | Striatum-like amygdalar nuclei | 0.23 | |
| 0.21 | | |||
| 1190002N15Rik | STR | Striatum | 0.46 | |
| 0.48 | | |||
| 1190002N15Rik | STRd | Striatum dorsal region | 0.62 | |
| 0.69 | | |||
| 1190002N15Rik | STRv | Striatum ventral region | 0.22 | |
| 0.2 | | |||
| 1190002N15Rik | TH | Thalamus | 0.35 | |
| 0.56 | |