AutismKB 2.0

Annotation Detail for ETV1


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Basic Information Top
Gene Symbol:ETV1 ( DKFZp781L0674,ER81,MGC104699,MGC120533,MGC120534 )
Gene Full Name: ets variant 1
Band: 7p21.2
Quick LinksEntrez ID:2115; OMIM: 600541; Uniprot ID:ETV1_HUMAN; ENSEMBL ID: ENSG00000006468; HGNC ID: 3490
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst5 / 6231980
fetus30 / 56401253
neonate1 / 3109732
infant1 / 2362042
juvenile0 / 555560 
adult44 / 193912122
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor0 / 1142460 
esophageal tumor1 / 1729057
gastrointestinal tumor1 / 1193698
germ cell tumor18 / 26384568
glioma13 / 106883121
head and neck tumor1 / 1363027
kidney tumor5 / 6895972
leukemia0 / 958420 
liver tumor2 / 9635920
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal249 / 336030774
ovarian tumor1 / 7668213
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer2 / 10268019
retinoblastoma0 / 463560 
skin tumor9 / 12494972
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland3 / 3319790
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone2 / 7165527
bone marrow1 / 4880120
brain227 / 1100989206
cervix0 / 481710 
connective tissue8 / 14925553
ear0 / 162120 
embryonic tissue11 / 21572250
esophagus1 / 2020949
eye2 / 2110549
heart3 / 8962633
intestine0 / 2344720 
kidney8 / 21177737
larynx0 / 241450 
liver2 / 2077439
lung8 / 33697423
lymph0 / 442700 
lymph node0 / 916100 
mammary gland3 / 15327119
mouth1 / 6705214
muscle6 / 10771555
nerve0 / 157680 
ovary1 / 1020519
pancreas3 / 21481213
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta5 / 28082517
prostate2 / 18934510
salivary gland1 / 2015549
skin10 / 21057447
spleen1 / 5395218
stomach1 / 9661910
testis14 / 33044242
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea12 / 52413228
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 206501_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.05
Adipocyte5.7
AdrenalCortex6.05
Adrenalgland4.8
Amygdala6.15
Appendix5.9
AtrioventricularNode11.8
BDCA4+_DentriticCells6.4
Bonemarrow5.8
BronchialEpithelialCells5.45
CD105+_Endothelial5.85
CD14+_Monocytes6.05
CD19+_BCells(neg._sel.)6.2
CD33+_Myeloid7.4
CD34+6.85
CD4+_Tcells6.05
CD56+_NKCells6.95
CD71+_EarlyErythroid5.4
CD8+_Tcells5.7
CardiacMyocytes7.15
Caudatenucleus5.55
Cerebellum19.85
CerebellumPeduncles39.6
CiliaryGanglion4.1
CingulateCortex5.9
Colorectaladenocarcinoma5.8
DorsalRootGanglion4.5
FetalThyroid5.65
Fetalbrain6.05
Fetalliver5
Fetallung4.85
GlobusPallidus5.6
Heart7.2
Hypothalamus6.35
Kidney4.7
Leukemia_chronicMyelogenousK-5625.2
Leukemia_promyelocytic-HL-605.05
Leukemialymphoblastic(MOLT-4)4.7
Liver7.55
Lung6.4
Lymphnode5.05
Lymphoma_burkitts(Daudi)7.35
Lymphoma_burkitts(Raji)8.75
MedullaOblongata5.9
OccipitalLobe5.2
OlfactoryBulb4.6
Ovary3.8
Pancreas4.6
PancreaticIslet6.3
ParietalLobe6.8
Pituitary7.45
Placenta5.75
Pons5.5
PrefrontalCortex7.1
Prostate6.85
Salivarygland5.7
SkeletalMuscle6.75
Skin5.5
SmoothMuscle6.45
Spinalcord6.15
SubthalamicNucleus5.25
SuperiorCervicalGanglion7.7
TemporalLobe5.35
Testis5
TestisGermCell4.85
TestisIntersitial4.9
TestisLeydigCell5.7
TestisSeminiferousTubule5.3
Thalamus6.1
Thymus4.4
Thyroid7.35
Tongue5.55
Tonsil5.45
Trachea4.85
TrigeminalGanglion5.7
Uterus4.8
UterusCorpus5.3
WholeBlood6.3
Wholebrain5
colon5.85
pineal_day7.22
pineal_night7.64
retina7.025
small_intestine5.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P78491
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.59 ± 0.47
Basal Forebrain6.27 ± 0.18
Basal Part of Pons7.87 ± 0.42
Cerebellar Cortex7.65 ± 0.48
Cerebellar Nuclei4.74 ± 0.61
Claustrum5.16 ± 1.24
Epithalamus5.74 ± 1.5
Frontal Lobe6.67 ± 0.9
Globus Pallidus5.24 ± 0.94
Hypothalamus5.58 ± 0.59
Insula6.41 ± 0.42
Limbic Lobe6.35 ± 1.19
Mesencephalon5.92 ± 0.99
Myelencephalon6.3 ± 0.92
Occipital Lobe6.13 ± 1.16
Parietal Lobe6.57 ± 0.79
Pontine Tegmentum6.3 ± 1
Striatum6.02 ± 0.95
Subthalamus5.57 ± 0.57
Temporal Lobe6.27 ± 0.7
Thalamus7.48 ± 0.85
White Matter2.82 ± 0.82
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Etv1CBCerebellum100
100
Etv1CTXCerebral cortex40.23
49.86
Etv1HIPHippocampal region21.49
37.37
Etv1HPFHippocampal formation32.13
58.82
Etv1HYHypothalamus7.75
6.4
Etv1LSXLateral septal complex11.26
12.49
Etv1MBMidbrain13.18
13.08
Etv1MYMedulla17.87
17.02
Etv1OLFOlfactory bulb26.91
30.48
Etv1PPons16.2
14.13
Etv1PALPallidum19.79
23.23
Etv1RHPRetrohippocampal region45.4
79.91
Etv1sAMYStriatum-like amygdalar nuclei18.22
28.36
Etv1STRStriatum16.03
15.1
Etv1STRdStriatum dorsal region16.71
14.42
Etv1STRvStriatum ventral region12.3
10.12
Etv1THThalamus24.12
25.62
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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