AutismKB 2.0

Annotation Detail for ETV3


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Basic Information Top
Gene Symbol:ETV3 ( FLJ79173,METS,PE-1,PE1,bA110J1.4 )
Gene Full Name: ets variant 3
Band: 1q23.1
Quick LinksEntrez ID:2117; OMIM: 164873; Uniprot ID:ETV3_HUMAN; ENSEMBL ID: ENSG00000117036; HGNC ID: 3492
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst0 / 623190 
fetus4 / 5640127
neonate0 / 310970 
infant1 / 2362042
juvenile1 / 5555617
adult30 / 193912115
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma1 / 1747557
breast (mammary gland) tumor0 / 941780 
cervical tumor1 / 3436629
chondrosarcoma0 / 828230 
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma0 / 1068830 
head and neck tumor2 / 13630214
kidney tumor1 / 6895914
leukemia2 / 9584220
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal28 / 33603078
ovarian tumor1 / 7668213
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood2 / 12347816
bone0 / 716550 
bone marrow3 / 4880161
brain10 / 11009899
cervix1 / 4817120
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue5 / 21572223
esophagus0 / 202090 
eye2 / 2110549
heart0 / 896260 
intestine9 / 23447238
kidney1 / 2117774
larynx0 / 241450 
liver3 / 20774314
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland2 / 15327113
mouth1 / 6705214
muscle0 / 1077150 
nerve0 / 157680 
ovary1 / 1020519
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate2 / 18934510
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 214480_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.75
Adipocyte4.95
AdrenalCortex5.85
Adrenalgland4.2
Amygdala5.25
Appendix5.7
AtrioventricularNode3.7
BDCA4+_DentriticCells5.75
Bonemarrow5.1
BronchialEpithelialCells4.85
CD105+_Endothelial5.1
CD14+_Monocytes5.3
CD19+_BCells(neg._sel.)5.2
CD33+_Myeloid6.25
CD34+6.5
CD4+_Tcells5.3
CD56+_NKCells5.8
CD71+_EarlyErythroid4.7
CD8+_Tcells5
CardiacMyocytes7.35
Caudatenucleus4.5
Cerebellum4.1
CerebellumPeduncles5.85
CiliaryGanglion4.15
CingulateCortex5.15
Colorectaladenocarcinoma5.1
DorsalRootGanglion3.8
FetalThyroid4.9
Fetalbrain5.05
Fetalliver4.55
Fetallung3.8
GlobusPallidus3.95
Heart7.2
Hypothalamus5.45
Kidney4
Leukemia_chronicMyelogenousK-5624.55
Leukemia_promyelocytic-HL-604.45
Leukemialymphoblastic(MOLT-4)4.1
Liver6.9
Lung5.6
Lymphnode4.35
Lymphoma_burkitts(Daudi)6.4
Lymphoma_burkitts(Raji)7.35
MedullaOblongata4.65
OccipitalLobe4.55
OlfactoryBulb4
Ovary3.4
Pancreas4
PancreaticIslet5.3
ParietalLobe5.45
Pituitary5.75
Placenta5.3
Pons4.75
PrefrontalCortex5.9
Prostate6
Salivarygland4
SkeletalMuscle6.55
Skin3.95
SmoothMuscle5.65
Spinalcord5.3
SubthalamicNucleus4.55
SuperiorCervicalGanglion5.55
TemporalLobe4.6
Testis4.35
TestisGermCell4.15
TestisIntersitial4.25
TestisLeydigCell5.05
TestisSeminiferousTubule4.3
Thalamus5.15
Thymus3.95
Thyroid6.4
Tongue5.1
Tonsil4.9
Trachea4.2
TrigeminalGanglion5.55
Uterus4.1
UterusCorpus4.55
WholeBlood5.6
Wholebrain4.2
colon5
pineal_day6.24
pineal_night6.18
retina6
small_intestine4.95
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P400945
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.82 ± 0.45
Basal Forebrain4.79 ± 0.38
Basal Part of Pons4.45 ± 0.48
Cerebellar Cortex4.79 ± 0.41
Cerebellar Nuclei4.68 ± 0.56
Claustrum5.13 ± 0.79
Epithalamus4.31 ± 0.43
Frontal Lobe4.43 ± 0.49
Globus Pallidus4.19 ± 0.64
Hypothalamus4.41 ± 0.4
Insula4.46 ± 0.62
Limbic Lobe4.74 ± 0.58
Mesencephalon4.58 ± 0.47
Myelencephalon4.55 ± 0.51
Occipital Lobe5.03 ± 0.61
Parietal Lobe4.56 ± 0.53
Pontine Tegmentum4.52 ± 0.64
Striatum4.58 ± 0.48
Subthalamus4.2 ± 0.5
Temporal Lobe4.45 ± 0.52
Thalamus4.54 ± 0.49
White Matter4.17 ± 0.53
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Etv3CBCerebellum20.18
20.4
Etv3CTXCerebral cortex12.93
8.52
Etv3HIPHippocampal region20.09
11.11
Etv3HPFHippocampal formation18.35
11.75
Etv3HYHypothalamus7.51
4.53
Etv3LSXLateral septal complex8
5.55
Etv3MBMidbrain7.36
5.88
Etv3MYMedulla14.94
12.86
Etv3OLFOlfactory bulb22.31
13.88
Etv3PPons10.9
9.7
Etv3PALPallidum6.93
4.77
Etv3RHPRetrohippocampal region15.68
12.32
Etv3sAMYStriatum-like amygdalar nuclei10.29
6.14
Etv3STRStriatum4.65
2.79
Etv3STRdStriatum dorsal region4.17
2.49
Etv3STRvStriatum ventral region2.09
1.12
Etv3THThalamus5.76
3.77
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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