AutismKB 2.0

Annotation Detail for EVI2A


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Basic Information Top
Gene Symbol:EVI2A ( EVDA,EVI-2A,EVI2 )
Gene Full Name: ecotropic viral integration site 2A
Band: 17q11.2
Quick LinksEntrez ID:2123; OMIM: 158380; Uniprot ID:EVI2A_HUMAN; ENSEMBL ID: ENSG00000126860; HGNC ID: 3499
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus8 / 56401214
neonate0 / 310970 
infant1 / 2362042
juvenile0 / 555560 
adult56 / 193912128
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma7 / 8282384
colorectal tumor4 / 11424635
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor2 / 2638457
glioma2 / 10688318
head and neck tumor3 / 13630222
kidney tumor2 / 6895929
leukemia2 / 9584220
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma3 / 7175541
non-neoplasia18 / 97250185
normal91 / 336030727
ovarian tumor2 / 7668226
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites0 / 400150 
bladder0 / 297570 
blood9 / 12347872
bone7 / 7165597
bone marrow0 / 488010 
brain102 / 110098992
cervix0 / 481710 
connective tissue4 / 14925526
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus0 / 202090 
eye1 / 2110544
heart0 / 896260 
intestine6 / 23447225
kidney3 / 21177714
larynx1 / 2414541
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node13 / 91610141
mammary gland0 / 1532710 
mouth1 / 6705214
muscle1 / 1077159
nerve0 / 157680 
ovary2 / 10205119
pancreas4 / 21481218
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin0 / 2105740 
spleen1 / 5395218
stomach0 / 966190 
testis2 / 3304426
thymus3 / 8113136
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204774_at
Cell line Expression level Expression bar
721_B_lymphoblasts17.85
Adipocyte10.5
AdrenalCortex12.45
Adrenalgland6.8
Amygdala307.45
Appendix18.1
AtrioventricularNode11.35
BDCA4+_DentriticCells386.35
Bonemarrow11.1
BronchialEpithelialCells7.5
CD105+_Endothelial13.3
CD14+_Monocytes1204.6
CD19+_BCells(neg._sel.)293.6
CD33+_Myeloid1049.05
CD34+34.3
CD4+_Tcells443.95
CD56+_NKCells595.25
CD71+_EarlyErythroid8.55
CD8+_Tcells431.25
CardiacMyocytes9.05
Caudatenucleus281.8
Cerebellum21.3
CerebellumPeduncles20.7
CiliaryGanglion8.4
CingulateCortex107.75
Colorectaladenocarcinoma8.3
DorsalRootGanglion12.85
FetalThyroid8.4
Fetalbrain9.65
Fetalliver8.6
Fetallung15.75
GlobusPallidus29.8
Heart15.1
Hypothalamus697.95
Kidney6.45
Leukemia_chronicMyelogenousK-5628.3
Leukemia_promyelocytic-HL-6070.65
Leukemialymphoblastic(MOLT-4)73.05
Liver13.1
Lung11.15
Lymphnode145.65
Lymphoma_burkitts(Daudi)49.45
Lymphoma_burkitts(Raji)17
MedullaOblongata238
OccipitalLobe229.85
OlfactoryBulb53.2
Ovary7.75
Pancreas9.15
PancreaticIslet11.4
ParietalLobe359.85
Pituitary11
Placenta8
Pons107.35
PrefrontalCortex163.65
Prostate11.7
Salivarygland29.45
SkeletalMuscle14.85
Skin8.65
SmoothMuscle9.15
Spinalcord549.35
SubthalamicNucleus62.45
SuperiorCervicalGanglion20.95
TemporalLobe15.1
Testis7.35
TestisGermCell7.15
TestisIntersitial8.55
TestisLeydigCell9.45
TestisSeminiferousTubule8.05
Thalamus230.8
Thymus47.3
Thyroid13
Tongue12.85
Tonsil74.7
Trachea8.55
TrigeminalGanglion12.25
Uterus9.25
UterusCorpus10.05
WholeBlood1844.8
Wholebrain156.85
colon9.5
pineal_day11.5
pineal_night10.5
retina162.2
small_intestine9.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_1576_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.19 ± 0.97
Basal Forebrain3.23 ± 0.81
Basal Part of Pons2.71 ± 0.56
Cerebellar Cortex2.72 ± 0.59
Cerebellar Nuclei3.77 ± 0.83
Claustrum3.21 ± 0.69
Epithalamus2.92 ± 0.9
Frontal Lobe2.95 ± 0.9
Globus Pallidus4.85 ± 0.38
Hypothalamus2.59 ± 0.95
Insula2.39 ± 0.55
Limbic Lobe2.88 ± 0.77
Mesencephalon3.06 ± 0.88
Myelencephalon3.07 ± 0.9
Occipital Lobe3.04 ± 0.9
Parietal Lobe3.03 ± 0.87
Pontine Tegmentum3.35 ± 0.84
Striatum3.47 ± 0.9
Subthalamus3.86 ± 0.64
Temporal Lobe2.87 ± 0.83
Thalamus3.24 ± 0.72
White Matter6.08 ± 0.22
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Evi2aCBCerebellum8.06
6.93
Evi2aCTXCerebral cortex6.78
4.46
Evi2aHIPHippocampal region12.22
10.3
Evi2aHPFHippocampal formation12.46
9.63
Evi2aHYHypothalamus10.63
7.39
Evi2aLSXLateral septal complex13.66
9.07
Evi2aMBMidbrain15.3
10.39
Evi2aMYMedulla27.9
22.82
Evi2aOLFOlfactory bulb11.98
7.99
Evi2aPPons20.79
16
Evi2aPALPallidum16.32
12.75
Evi2aRHPRetrohippocampal region12.27
8.34
Evi2asAMYStriatum-like amygdalar nuclei9.41
6.57
Evi2aSTRStriatum10.8
7.3
Evi2aSTRdStriatum dorsal region11.77
7.97
Evi2aSTRvStriatum ventral region7.82
5.26
Evi2aTHThalamus11.76
8.24
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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