AutismKB 2.0

Annotation Detail for FABP7


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Basic Information Top
Gene Symbol:FABP7 ( B-FABP,BLBP,DKFZp547J2313,FABPB,MRG )
Gene Full Name: fatty acid binding protein 7, brain
Band: 6q22.31
Quick LinksEntrez ID:2173; OMIM: 602965; Uniprot ID:FABP7_HUMAN; ENSEMBL ID: ENSG00000164434; HGNC ID: 3562
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus56 / 56401299
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult36 / 193912118
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor4 / 9417842
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor10 / 26384537
glioma3 / 10688328
head and neck tumor0 / 1363020 
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal87 / 336030725
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor3 / 12494924
soft tissue/muscle tissue tumor8 / 12519163
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone3 / 7165541
bone marrow0 / 488010 
brain86 / 110098978
cervix0 / 481710 
connective tissue8 / 14925553
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye13 / 21105461
heart3 / 8962633
intestine0 / 2344720 
kidney7 / 21177733
larynx0 / 241450 
liver0 / 2077430 
lung3 / 3369748
lymph0 / 442700 
lymph node0 / 916100 
mammary gland4 / 15327126
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin3 / 21057414
spleen0 / 539520 
stomach0 / 966190 
testis2 / 3304426
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205029_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts10.3
Adipocyte9.65
AdrenalCortex15.65
Adrenalgland9.4
Amygdala170.95
Appendix14.5
AtrioventricularNode15.25
BDCA4+_DentriticCells8.9
Bonemarrow12.55
BronchialEpithelialCells8.85
CD105+_Endothelial9.2
CD14+_Monocytes11.2
CD19+_BCells(neg._sel.)9.75
CD33+_Myeloid11.3
CD34+11.1
CD4+_Tcells9.15
CD56+_NKCells10.45
CD71+_EarlyErythroid9.95
CD8+_Tcells8.05
CardiacMyocytes26.05
Caudatenucleus19.6
Cerebellum358.45
CerebellumPeduncles324.25
CiliaryGanglion60.85
CingulateCortex51.1
Colorectaladenocarcinoma9.5
DorsalRootGanglion24.6
FetalThyroid10.75
Fetalbrain3118.25
Fetalliver8.85
Fetallung7.15
GlobusPallidus25.75
Heart21.9
Hypothalamus24.15
Kidney10.25
Leukemia_chronicMyelogenousK-5628.45
Leukemia_promyelocytic-HL-608.35
Leukemialymphoblastic(MOLT-4)7.1
Liver18.2
Lung10.6
Lymphnode7.6
Lymphoma_burkitts(Daudi)13.8
Lymphoma_burkitts(Raji)17.25
MedullaOblongata30.35
OccipitalLobe109.1
OlfactoryBulb7.55
Ovary9.15
Pancreas9
PancreaticIslet10.8
ParietalLobe18.3
Pituitary12.2
Placenta9.05
Pons12.15
PrefrontalCortex172.2
Prostate10.55
Salivarygland8.7
SkeletalMuscle21.8
Skin15.15
SmoothMuscle10.9
Spinalcord22.35
SubthalamicNucleus17.85
SuperiorCervicalGanglion21.65
TemporalLobe70.45
Testis8.3
TestisGermCell7.4
TestisIntersitial8.95
TestisLeydigCell11.2
TestisSeminiferousTubule8.3
Thalamus21.85
Thymus7
Thyroid10.85
Tongue14.25
Tonsil10.35
Trachea7.9
TrigeminalGanglion18.85
Uterus7.2
UterusCorpus12.45
WholeBlood10.25
Wholebrain128.65
colon9.3
pineal_day24.12
pineal_night23.54
retina49.7
small_intestine8.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_16374_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.63 ± 0.56
Basal Forebrain4.36 ± 0.3
Basal Part of Pons4.8 ± 0.32
Cerebellar Cortex4.95 ± 0.33
Cerebellar Nuclei4.38 ± 0.7
Claustrum4.76 ± 0.68
Epithalamus4.62 ± 0.8
Frontal Lobe4.39 ± 0.57
Globus Pallidus3.95 ± 0.51
Hypothalamus4.58 ± 0.52
Insula4.46 ± 0.45
Limbic Lobe4.68 ± 0.42
Mesencephalon4.32 ± 0.54
Myelencephalon4.46 ± 0.51
Occipital Lobe4.23 ± 0.56
Parietal Lobe4.32 ± 0.5
Pontine Tegmentum4.15 ± 0.63
Striatum3.97 ± 0.55
Subthalamus4.27 ± 0.7
Temporal Lobe4.46 ± 0.43
Thalamus4.29 ± 0.49
White Matter3.93 ± 0.45
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Fabp7CBCerebellum19.51
68.08
Fabp7CTXCerebral cortex1.48
2.25
Fabp7HIPHippocampal region6.46
12.67
Fabp7HPFHippocampal formation4.56
8.08
Fabp7HYHypothalamus1.32
1.81
Fabp7LSXLateral septal complex4.79
6.9
Fabp7MBMidbrain2.73
7.26
Fabp7MYMedulla2.51
4.27
Fabp7OLFOlfactory bulb23.93
33.93
Fabp7PPons1.62
2.92
Fabp7PALPallidum0.85
0.79
Fabp7RHPRetrohippocampal region1.92
2.7
Fabp7sAMYStriatum-like amygdalar nuclei3.86
6.62
Fabp7STRStriatum2.08
3.01
Fabp7STRdStriatum dorsal region0.76
1.09
Fabp7STRvStriatum ventral region4.11
4.65
Fabp7THThalamus2.76
6.69
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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