Annotation Detail for SAMD9L
Basic Information Top
| Gene Symbol: | SAMD9L ( C7orf6,DRIF2,FLJ39885,KIAA2005,UEF1 ) |
|---|---|
| Gene Full Name: | sterile alpha motif domain containing 9-like |
| Band: | 7q21.2 |
| Quick Links | Entrez ID:219285; OMIM: 611170; Uniprot ID:SAM9L_HUMAN; ENSEMBL ID: ENSG00000177409; HGNC ID: 1349 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.489118
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 11 / 564012 | 19 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 29 / 1939121 | 14 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 3 / 82823 | 36 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 |  |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 55 / 3360307 | 16 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 |  |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 5 / 123478 | 40 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 4 / 1100989 | 3 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 1 / 211054 | 4 | |
| heart | 1 / 89626 | 11 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 3 / 153271 | 19 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 7 / 280825 | 24 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 2 / 96619 | 20 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 13 / 232878 | 55 | |
| vascular | 1 / 51780 | 19 | |
- Probe name: CUST_5733_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.21 ± 0.85 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.83 ± 0.29 | |
| Basal Part of Pons | 2.95 ± 0.42 | |
| Cerebellar Cortex | 2.47 ± 0.36 | |
| Cerebellar Nuclei | 2.9 ± 0.7 | |
| Claustrum | 2.92 ± 0.48 | |
| Epithalamus | 3.31 ± 0.42 | |
| Frontal Lobe | 2.73 ± 0.54 | |
| Globus Pallidus | 4.28 ± 0.53 | |
| Hypothalamus | 2.82 ± 0.69 | |
| Insula | 2.7 ± 0.34 | |
| Limbic Lobe | 2.76 ± 0.62 | |
| Mesencephalon | 2.99 ± 0.73 | |
| Myelencephalon | 2.96 ± 0.55 | |
| Occipital Lobe | 2.89 ± 0.63 | |
| Parietal Lobe | 2.75 ± 0.66 | |
| Pontine Tegmentum | 2.91 ± 0.63 | |
| Striatum | 3.55 ± 0.45 | |
| Subthalamus | 2.43 ± 0.34 | |
| Temporal Lobe | 2.79 ± 0.55 | |
| Thalamus | 3.01 ± 0.48 | |
| White Matter | 3.02 ± 0.57 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| SAM9L_HUMAN_572 | 19 | 572 | 590 | GMENMLCISVNSHIYQRWK | PRIDE |