Annotation Detail for CYBASC3
Basic Information Top
| Gene Symbol: | CYBASC3 ( FLJ39724,LCYTB,MGC20446 ) |
|---|---|
| Gene Full Name: | cytochrome b, ascorbate dependent 3 |
| Band: | 11q12.2 |
| Quick Links | Entrez ID:220002; OMIM: NA; Uniprot ID:CYAC3_HUMAN; ENSEMBL ID: ENSG00000162144; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.22546
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 3 / 62319 | 48 | |
| fetus | 27 / 564012 | 47 | |
| neonate | 16 / 31097 | 514 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 3 / 55556 | 53 |  |
| adult | 163 / 1939121 | 84 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 3 / 34366 | 87 | |
| chondrosarcoma | 13 / 82823 | 156 | |
| colorectal tumor | 11 / 114246 | 96 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 26 / 263845 | 98 | |
| glioma | 12 / 106883 | 112 | |
| head and neck tumor | 11 / 136302 | 80 | |
| kidney tumor | 5 / 68959 | 72 | |
| leukemia | 15 / 95842 | 156 | |
| liver tumor | 1 / 96359 | 10 |  |
| lung tumor | 8 / 103127 | 77 | |
| lymphoma | 28 / 71755 | 390 | |
| non-neoplasia | 14 / 97250 | 143 | |
| normal | 421 / 3360307 | 125 | |
| ovarian tumor | 20 / 76682 | 260 | |
| pancreatic tumor | 15 / 104616 | 143 | |
| primitive neuroectodermal tumor of the CNS | 35 / 125680 | 278 | |
| prostate cancer | 10 / 102680 | 97 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 35 / 124949 | 280 | |
| soft tissue/muscle tissue tumor | 8 / 125191 | 63 | |
| uterine tumor | 4 / 90257 | 44 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 2 / 13106 | 152 | |
| adrenal gland | 26 / 33197 | 783 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 1 / 29757 | 33 | |
| blood | 43 / 123478 | 348 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 5 / 48801 | 102 | |
| brain | 86 / 1100989 | 78 | |
| cervix | 9 / 48171 | 186 | |
| connective tissue | 19 / 149255 | 127 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 9 / 211054 | 42 | |
| heart | 4 / 89626 | 44 | |
| intestine | 21 / 234472 | 89 | |
| kidney | 26 / 211777 | 122 | |
| larynx | 0 / 24145 | 0 | |
| liver | 4 / 207743 | 19 | |
| lung | 47 / 336974 | 139 | |
| lymph | 21 / 44270 | 474 | |
| lymph node | 18 / 91610 | 196 | |
| mammary gland | 8 / 153271 | 52 | |
| mouth | 10 / 67052 | 149 | |
| muscle | 9 / 107715 | 83 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 25 / 102051 | 244 | |
| pancreas | 20 / 214812 | 93 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 27 / 41328 | 653 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 32 / 280825 | 113 | |
| prostate | 18 / 189345 | 95 | |
| salivary gland | 3 / 20155 | 148 | |
| skin | 56 / 210574 | 265 | |
| spleen | 44 / 53952 | 815 | |
| stomach | 2 / 96619 | 20 | |
| testis | 14 / 330442 | 42 | |
| thymus | 14 / 81131 | 172 | |
| thyroid | 4 / 47473 | 84 | |
| tonsil | 20 / 16999 | 1176 |  |
| trachea | 9 / 52413 | 171 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 15 / 232878 | 64 | |
| vascular | 4 / 51780 | 77 | |
Microarray in - Probe name: A_23_P342131
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.17 ± 0.53 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.38 ± 0.43 | |
| Basal Part of Pons | 3.93 ± 0.4 | |
| Cerebellar Cortex | 3.74 ± 0.58 | |
| Cerebellar Nuclei | 4.51 ± 0.54 | |
| Claustrum | 3.97 ± 0.87 | |
| Epithalamus | 3.87 ± 0.79 | |
| Frontal Lobe | 4.26 ± 0.62 | |
| Globus Pallidus | 4.34 ± 0.57 | |
| Hypothalamus | 3.65 ± 0.83 | |
| Insula | 4.04 ± 0.57 | |
| Limbic Lobe | 3.96 ± 0.61 | |
| Mesencephalon | 4.11 ± 0.63 | |
| Myelencephalon | 4.23 ± 0.63 | |
| Occipital Lobe | 3.67 ± 0.73 | |
| Parietal Lobe | 3.94 ± 0.69 | |
| Pontine Tegmentum | 3.96 ± 0.74 | |
| Striatum | 4.43 ± 0.63 | |
| Subthalamus | 4.29 ± 0.51 | |
| Temporal Lobe | 4.08 ± 0.54 | |
| Thalamus | 4.2 ± 0.61 | |
| White Matter | 3.95 ± 0.65 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Cybasc3 | CB | Cerebellum | 0.88 | |
| 1.8 | | |||
| Cybasc3 | CTX | Cerebral cortex | 0.51 | |
| 0.65 | | |||
| Cybasc3 | HIP | Hippocampal region | 0.15 | |
| 0.28 | | |||
| Cybasc3 | HPF | Hippocampal formation | 0.29 | |
| 0.43 | | |||
| Cybasc3 | HY | Hypothalamus | 0.1 | |
| 0.14 | | |||
| Cybasc3 | LSX | Lateral septal complex | 0 | |
| 0 | | |||
| Cybasc3 | MB | Midbrain | 0.32 | |
| 0.35 | | |||
| Cybasc3 | MY | Medulla | 0.9 | |
| 1.29 | | |||
| Cybasc3 | OLF | Olfactory bulb | 0.28 | |
| 0.38 | | |||
| Cybasc3 | P | Pons | 0.17 | |
| 0.17 | | |||
| Cybasc3 | PAL | Pallidum | 0.08 | |
| 0.1 | | |||
| Cybasc3 | RHP | Retrohippocampal region | 0.3 | |
| 0.36 | | |||
| Cybasc3 | sAMY | Striatum-like amygdalar nuclei | 0.16 | |
| 0.38 | | |||
| Cybasc3 | STR | Striatum | 0.1 | |
| 0.13 | | |||
| Cybasc3 | STRd | Striatum dorsal region | 0.09 | |
| 0.06 | | |||
| Cybasc3 | STRv | Striatum ventral region | 0.14 | |
| 0.23 | | |||
| Cybasc3 | TH | Thalamus | 0.1 | |
| 0.07 | |