Annotation Detail for LRTOMT
Basic Information Top
| Gene Symbol: | LRTOMT ( COMT2,DFNB63,FLJ52451,LRRC51,LRTOMT1,LRTOMT2 ) |
|---|---|
| Gene Full Name: | leucine rich transmembrane and 0-methyltransferase domain containing |
| Band: | 11q13.4 |
| Quick Links | Entrez ID:220074; OMIM: 611451,612414; Uniprot ID:LRC51_HUMAN; ENSEMBL ID: ENSG00000184154,ENSG00000241994; HGNC ID: 25033 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.317243
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 2 / 70761 | 28 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 11 / 564012 | 19 | |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 47 / 1939121 | 24 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 2 / 34366 | 58 |  |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 4 / 97250 | 41 | |
| normal | 90 / 3360307 | 26 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 23 / 1100989 | 20 | |
| cervix | 2 / 48171 | 41 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 7 / 211054 | 33 | |
| heart | 0 / 89626 | 0 | |
| intestine | 3 / 234472 | 12 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 8 / 336974 | 23 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 5 / 210574 | 23 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 0 / 96619 | 0 | |
| testis | 16 / 330442 | 48 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P184385
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.62 ± 0.27 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.51 ± 0.16 | |
| Basal Part of Pons | 7.13 ± 0.31 | |
| Cerebellar Cortex | 6.95 ± 0.22 | |
| Cerebellar Nuclei | 7.56 ± 0.33 | |
| Claustrum | 7.39 ± 0.3 | |
| Epithalamus | 8.29 ± 1.37 | |
| Frontal Lobe | 7.36 ± 0.49 | |
| Globus Pallidus | 7.92 ± 0.22 | |
| Hypothalamus | 7.51 ± 0.24 | |
| Insula | 7.59 ± 0.36 | |
| Limbic Lobe | 7.31 ± 0.48 | |
| Mesencephalon | 7.63 ± 0.52 | |
| Myelencephalon | 7.55 ± 0.54 | |
| Occipital Lobe | 7.43 ± 0.4 | |
| Parietal Lobe | 7.4 ± 0.37 | |
| Pontine Tegmentum | 7.45 ± 0.35 | |
| Striatum | 8.14 ± 0.4 | |
| Subthalamus | 7.16 ± 0.33 | |
| Temporal Lobe | 7.48 ± 0.41 | |
| Thalamus | 7.52 ± 0.35 | |
| White Matter | 8.16 ± 0.38 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Lrrc51 | CB | Cerebellum | 4.4 | |
| 5.65 | | |||
| Lrrc51 | CTX | Cerebral cortex | 8.99 | |
| 7.74 | | |||
| Lrrc51 | HIP | Hippocampal region | 3.83 | |
| 3.79 | | |||
| Lrrc51 | HPF | Hippocampal formation | 4.57 | |
| 3.84 | | |||
| Lrrc51 | HY | Hypothalamus | 5.92 | |
| 4.15 | | |||
| Lrrc51 | LSX | Lateral septal complex | 5.81 | |
| 4.01 | | |||
| Lrrc51 | MB | Midbrain | 5.53 | |
| 5.41 | | |||
| Lrrc51 | MY | Medulla | 10.65 | |
| 10.95 | | |||
| Lrrc51 | OLF | Olfactory bulb | 17.56 | |
| 13.37 | | |||
| Lrrc51 | P | Pons | 10.5 | |
| 10.16 | | |||
| Lrrc51 | PAL | Pallidum | 9.66 | |
| 7.46 | | |||
| Lrrc51 | RHP | Retrohippocampal region | 6.02 | |
| 4.04 | | |||
| Lrrc51 | sAMY | Striatum-like amygdalar nuclei | 18.66 | |
| 12.72 | | |||
| Lrrc51 | STR | Striatum | 7.82 | |
| 5.23 | | |||
| Lrrc51 | STRd | Striatum dorsal region | 5.99 | |
| 4.06 | | |||
| Lrrc51 | STRv | Striatum ventral region | 10.78 | |
| 6.61 | | |||
| Lrrc51 | TH | Thalamus | 7.76 | |
| 5.54 | |