Annotation Detail for ZNF438
Basic Information Top
| Gene Symbol: | ZNF438 ( FLJ32761,MGC126671,bA330O11.1 ) |
|---|---|
| Gene Full Name: | zinc finger protein 438 |
| Band: | 10p11.23 |
| Quick Links | Entrez ID:220929; OMIM: NA; Uniprot ID:ZN438_HUMAN; ENSEMBL ID: ENSG00000183621; HGNC ID: 21029 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.660642
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 6 / 564012 | 10 |  |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 29 / 1939121 | 14 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 6 / 106883 | 56 |  |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 45 / 3360307 | 13 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 5 / 123478 | 40 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 22 / 1100989 | 19 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 3 / 215722 | 13 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 1 / 89626 | 11 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 6 / 336974 | 17 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 3 / 96619 | 31 | |
| testis | 10 / 330442 | 30 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 7 / 232878 | 30 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: A_23_P161156
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.1 ± 0.19 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.28 ± 0.16 | |
| Basal Part of Pons | 7.91 ± 0.18 | |
| Cerebellar Cortex | 8.08 ± 0.18 | |
| Cerebellar Nuclei | 7.92 ± 0.32 | |
| Claustrum | 7.93 ± 0.27 | |
| Epithalamus | 8.55 ± 0.22 | |
| Frontal Lobe | 8.08 ± 0.24 | |
| Globus Pallidus | 8.57 ± 0.19 | |
| Hypothalamus | 8.06 ± 0.24 | |
| Insula | 8.27 ± 0.17 | |
| Limbic Lobe | 8.1 ± 0.23 | |
| Mesencephalon | 8.05 ± 0.29 | |
| Myelencephalon | 8.14 ± 0.26 | |
| Occipital Lobe | 8.16 ± 0.21 | |
| Parietal Lobe | 8 ± 0.21 | |
| Pontine Tegmentum | 8.13 ± 0.21 | |
| Striatum | 8.22 ± 0.25 | |
| Subthalamus | 8.01 ± 0.26 | |
| Temporal Lobe | 8.09 ± 0.21 | |
| Thalamus | 8.15 ± 0.21 | |
| White Matter | 8.3 ± 0.15 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Zfp438 | CB | Cerebellum | 6.94 | |
| 7.77 | | |||
| Zfp438 | CTX | Cerebral cortex | 6.46 | |
| 4.64 | | |||
| Zfp438 | HIP | Hippocampal region | 4.31 | |
| 3.42 | | |||
| Zfp438 | HPF | Hippocampal formation | 4.57 | |
| 3.53 | | |||
| Zfp438 | HY | Hypothalamus | 1.64 | |
| 1.18 | | |||
| Zfp438 | LSX | Lateral septal complex | 0.32 | |
| 0.61 | | |||
| Zfp438 | MB | Midbrain | 2.26 | |
| 2.01 | | |||
| Zfp438 | MY | Medulla | 11.32 | |
| 10.28 | | |||
| Zfp438 | OLF | Olfactory bulb | 9.39 | |
| 6.61 | | |||
| Zfp438 | P | Pons | 5.62 | |
| 5.1 | | |||
| Zfp438 | PAL | Pallidum | 3.71 | |
| 2.87 | | |||
| Zfp438 | RHP | Retrohippocampal region | 4.76 | |
| 3.5 | | |||
| Zfp438 | sAMY | Striatum-like amygdalar nuclei | 4.89 | |
| 3.25 | | |||
| Zfp438 | STR | Striatum | 2.82 | |
| 1.81 | | |||
| Zfp438 | STRd | Striatum dorsal region | 2.43 | |
| 1.57 | | |||
| Zfp438 | STRv | Striatum ventral region | 4.56 | |
| 2.52 | | |||
| Zfp438 | TH | Thalamus | 3.16 | |
| 2.53 | |