AutismKB 2.0

Annotation Detail for HNRNPUL2


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Basic Information Top
Gene Symbol:HNRNPUL2 ( DKFZp762N1910,HNRPUL2 )
Gene Full Name: heterogeneous nuclear ribonucleoprotein U-like 2
Band: 11q12.3
Quick LinksEntrez ID:221092; OMIM: NA; Uniprot ID:HNRL2_HUMAN; ENSEMBL ID: ENSG00000214753; HGNC ID: 25451
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst3 / 6231948
fetus1 / 5640121
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult122 / 193912162
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma3 / 17475171
breast (mammary gland) tumor6 / 9417863
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor20 / 114246175
esophageal tumor1 / 1729057
gastrointestinal tumor1 / 1193698
germ cell tumor8 / 26384530
glioma5 / 10688346
head and neck tumor5 / 13630236
kidney tumor2 / 6895929
leukemia4 / 9584241
liver tumor0 / 963590 
lung tumor6 / 10312758
lymphoma0 / 717550 
non-neoplasia2 / 9725020
normal96 / 336030728
ovarian tumor1 / 7668213
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma3 / 4635664
skin tumor3 / 12494924
soft tissue/muscle tissue tumor5 / 12519139
uterine tumor6 / 9025766
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder2 / 2975767
blood2 / 12347816
bone0 / 716550 
bone marrow1 / 4880120
brain14 / 110098912
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue11 / 21572250
esophagus1 / 2020949
eye10 / 21105447
heart0 / 896260 
intestine28 / 234472119
kidney6 / 21177728
larynx0 / 241450 
liver3 / 20774314
lung9 / 33697426
lymph0 / 442700 
lymph node0 / 916100 
mammary gland7 / 15327145
mouth1 / 6705214
muscle1 / 1077159
nerve1 / 1576863
ovary1 / 1020519
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta22 / 28082578
prostate25 / 189345132
salivary gland0 / 201550 
skin4 / 21057418
spleen1 / 5395218
stomach0 / 966190 
testis3 / 3304429
thymus0 / 811310 
thyroid4 / 4747384
tonsil1 / 1699958
trachea0 / 524130 
umbilical cord0 / 136800 
uterus15 / 23287864
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 66053_at
Cell line Expression level Expression bar
721_B_lymphoblasts19
Adipocyte10.35
AdrenalCortex15.6
Adrenalgland9.45
Amygdala10.25
Appendix14.2
AtrioventricularNode17.65
BDCA4+_DentriticCells16.65
Bonemarrow12
BronchialEpithelialCells10
CD105+_Endothelial19
CD14+_Monocytes12.75
CD19+_BCells(neg._sel.)11.05
CD33+_Myeloid14.55
CD34+13.8
CD4+_Tcells14.55
CD56+_NKCells22.5
CD71+_EarlyErythroid10.45
CD8+_Tcells10.8
CardiacMyocytes20.85
Caudatenucleus9.5
Cerebellum8.7
CerebellumPeduncles13.95
CiliaryGanglion19.55
CingulateCortex11.2
Colorectaladenocarcinoma10.55
DorsalRootGanglion11.25
FetalThyroid11.2
Fetalbrain10
Fetalliver9.65
Fetallung7.55
GlobusPallidus9.8
Heart18.6
Hypothalamus10.5
Kidney10.1
Leukemia_chronicMyelogenousK-5629.5
Leukemia_promyelocytic-HL-609.05
Leukemialymphoblastic(MOLT-4)8.2
Liver17.9
Lung12.3
Lymphnode8.6
Lymphoma_burkitts(Daudi)14.1
Lymphoma_burkitts(Raji)16.65
MedullaOblongata9.2
OccipitalLobe9.45
OlfactoryBulb8.05
Ovary10.25
Pancreas10.4
PancreaticIslet11.55
ParietalLobe12.2
Pituitary12.55
Placenta9.75
Pons10.75
PrefrontalCortex12
Prostate12.6
Salivarygland9.45
SkeletalMuscle21.35
Skin14.3
SmoothMuscle11.9
Spinalcord11.2
SubthalamicNucleus10.55
SuperiorCervicalGanglion19.85
TemporalLobe10
Testis8.75
TestisGermCell8.05
TestisIntersitial8.95
TestisLeydigCell11.35
TestisSeminiferousTubule9.05
Thalamus11.1
Thymus7.55
Thyroid13.95
Tongue13.35
Tonsil10.9
Trachea8.9
TrigeminalGanglion15.3
Uterus8.85
UterusCorpus12.4
WholeBlood10.8
Wholebrain8.5
colon10.75
pineal_day12.98
pineal_night12.82
retina12.35
small_intestine10.05
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P409626
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.14 ± 0.47
Basal Forebrain6.01 ± 0.13
Basal Part of Pons6.29 ± 0.25
Cerebellar Cortex6.29 ± 0.28
Cerebellar Nuclei6.21 ± 0.39
Claustrum6.04 ± 0.58
Epithalamus5.88 ± 0.25
Frontal Lobe6.05 ± 0.34
Globus Pallidus6.15 ± 0.38
Hypothalamus5.77 ± 0.49
Insula6.11 ± 0.33
Limbic Lobe6.06 ± 0.32
Mesencephalon5.99 ± 0.37
Myelencephalon6.03 ± 0.4
Occipital Lobe6.24 ± 0.37
Parietal Lobe6.22 ± 0.26
Pontine Tegmentum6.15 ± 0.34
Striatum6.24 ± 0.41
Subthalamus6.03 ± 0.73
Temporal Lobe6.02 ± 0.35
Thalamus6.09 ± 0.38
White Matter5.77 ± 0.25
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Hnrpul2CBCerebellum16.08
20.22
Hnrpul2CTXCerebral cortex53.38
43.66
Hnrpul2HIPHippocampal region39.23
56.83
Hnrpul2HPFHippocampal formation49.29
59.31
Hnrpul2HYHypothalamus10.78
8.69
Hnrpul2LSXLateral septal complex14.73
10.92
Hnrpul2MBMidbrain17.31
15.62
Hnrpul2MYMedulla19.69
22.09
Hnrpul2OLFOlfactory bulb46.05
40.27
Hnrpul2PPons18.02
18.65
Hnrpul2PALPallidum17.51
15.5
Hnrpul2RHPRetrohippocampal region68.35
65.25
Hnrpul2sAMYStriatum-like amygdalar nuclei28.7
21.15
Hnrpul2STRStriatum17.89
13.37
Hnrpul2STRdStriatum dorsal region18.6
14.43
Hnrpul2STRvStriatum ventral region12.48
8.21
Hnrpul2THThalamus21.8
17.94
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
HNRL2_HUMAN_0 0 0 0 DLLVQQASQCLSK PRIDE
HNRL2_HUMAN_1 5 1 5 MEVKR PRIDE
HNRL2_HUMAN_212 13 212 224 AYYEFREEAYHSR PRIDE
HNRL2_HUMAN_263 19 263 281 YGGQPLFSEKFPTLWSGAR PRIDE
HNRL2_HUMAN_480 14 480 493 YNVLGAETVLNQMR PRIDE
HNRL2_HUMAN_508 13 508 520 DLLVQQASQCLSK PRIDE
PAp00000538 9 398 406 ALLPHVLCK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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