Annotation Detail for C6orf136
Basic Information Top
| Gene Symbol: | C6orf136 ( MGC15854 ) |
|---|---|
| Gene Full Name: | chromosome 6 open reading frame 136 |
| Band: | 6p21.33 |
| Quick Links | Entrez ID:221545; OMIM: NA; Uniprot ID:CF136_HUMAN; ENSEMBL ID: ENSG00000204564; HGNC ID: 21301 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.591787
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 13 / 564012 | 23 | |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 35 / 1939121 | 18 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 5 / 95842 | 52 |  |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 62 / 3360307 | 18 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 3 / 124949 | 24 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 6 / 123478 | 48 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 25 / 1100989 | 22 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 2 / 89626 | 22 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 9 / 336974 | 26 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 2 / 280825 | 7 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 3 / 210574 | 14 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 2 / 96619 | 20 | |
| testis | 1 / 330442 | 3 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_23_P300826
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.35 ± 0.47 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 7.69 ± 0.19 | |
| Basal Part of Pons | 8.25 ± 0.3 | |
| Cerebellar Cortex | 8.09 ± 0.22 | |
| Cerebellar Nuclei | 8.43 ± 0.3 | |
| Claustrum | 7.54 ± 0.43 | |
| Epithalamus | 7.52 ± 0.29 | |
| Frontal Lobe | 8.04 ± 0.33 | |
| Globus Pallidus | 7.15 ± 0.3 | |
| Hypothalamus | 7.89 ± 0.3 | |
| Insula | 7.92 ± 0.24 | |
| Limbic Lobe | 7.65 ± 0.47 | |
| Mesencephalon | 7.71 ± 0.47 | |
| Myelencephalon | 7.78 ± 0.46 | |
| Occipital Lobe | 7.52 ± 0.48 | |
| Parietal Lobe | 7.92 ± 0.4 | |
| Pontine Tegmentum | 7.87 ± 0.38 | |
| Striatum | 7.28 ± 0.36 | |
| Subthalamus | 8.39 ± 0.24 | |
| Temporal Lobe | 7.94 ± 0.33 | |
| Thalamus | 7.95 ± 0.35 | |
| White Matter | 7.08 ± 0.55 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 2310061I04Rik | CB | Cerebellum | 88.44 | |
| 100 | | |||
| 2310061I04Rik | CTX | Cerebral cortex | 92.6 | |
| 74.82 | | |||
| 2310061I04Rik | HIP | Hippocampal region | 49.98 | |
| 70.22 | | |||
| 2310061I04Rik | HPF | Hippocampal formation | 66.11 | |
| 73.83 | | |||
| 2310061I04Rik | HY | Hypothalamus | 76.1 | |
| 65 | | |||
| 2310061I04Rik | LSX | Lateral septal complex | 69.3 | |
| 50.74 | | |||
| 2310061I04Rik | MB | Midbrain | 85.36 | |
| 85.3 | | |||
| 2310061I04Rik | MY | Medulla | 88.22 | |
| 100 | | |||
| 2310061I04Rik | OLF | Olfactory bulb | 81.63 | |
| 75.57 | | |||
| 2310061I04Rik | P | Pons | 84.62 | |
| 100 | | |||
| 2310061I04Rik | PAL | Pallidum | 84.44 | |
| 85.24 | | |||
| 2310061I04Rik | RHP | Retrohippocampal region | 91.39 | |
| 79.23 | | |||
| 2310061I04Rik | sAMY | Striatum-like amygdalar nuclei | 83.12 | |
| 67.17 | | |||
| 2310061I04Rik | STR | Striatum | 71 | |
| 53.72 | | |||
| 2310061I04Rik | STRd | Striatum dorsal region | 69.76 | |
| 53.17 | | |||
| 2310061I04Rik | STRv | Striatum ventral region | 77.24 | |
| 55.45 | | |||
| 2310061I04Rik | TH | Thalamus | 79.44 | |
| 72.3 | |